Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HTR1EP28566 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HTR1EP28566 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HTR1EP28566 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HTR1EP28566 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
HTR1EP28566 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.55■□□□□ 0.08
HTR1EP28566 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
HTR1EP28566 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HTR1EP28566 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HTR1EP28566 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
HTR1EP28566 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.55■□□□□ 0.08
HTR1EP28566 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.55■□□□□ 0.08
HTR1EP28566 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.55■□□□□ 0.08
HTR1EP28566 CEND1P1-201ENST00000451006 455 ntBASIC15.55■□□□□ 0.08
HTR1EP28566 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.55■□□□□ 0.08
HTR1EP28566 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.55■□□□□ 0.08
HTR1EP28566 MIR4751-201ENST00000578027 74 ntBASIC15.55■□□□□ 0.08
HTR1EP28566 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.55■□□□□ 0.08
HTR1EP28566 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.55■□□□□ 0.08
HTR1EP28566 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.55■□□□□ 0.08
HTR1EP28566 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
HTR1EP28566 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
HTR1EP28566 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HTR1EP28566 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
HTR1EP28566 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
HTR1EP28566 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
HTR1EP28566 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
HTR1EP28566 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HTR1EP28566 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HTR1EP28566 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.55■□□□□ 0.08
HTR1EP28566 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HTR1EP28566 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.55■□□□□ 0.08
HTR1EP28566 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HTR1EP28566 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HTR1EP28566 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
HTR1EP28566 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
HTR1EP28566 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HTR1EP28566 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.55■□□□□ 0.08
HTR1EP28566 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
HTR1EP28566 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
HTR1EP28566 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HTR1EP28566 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HTR1EP28566 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.54■□□□□ 0.08
HTR1EP28566 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HTR1EP28566 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HTR1EP28566 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.54■□□□□ 0.08
HTR1EP28566 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HTR1EP28566 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
HTR1EP28566 AC092919.2-201ENST00000623631 1645 ntBASIC15.54■□□□□ 0.08
HTR1EP28566 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
HTR1EP28566 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
HTR1EP28566 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.54■□□□□ 0.08
HTR1EP28566 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HTR1EP28566 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HTR1EP28566 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HTR1EP28566 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HTR1EP28566 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HTR1EP28566 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HTR1EP28566 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HTR1EP28566 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HTR1EP28566 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HTR1EP28566 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.54■□□□□ 0.08
HTR1EP28566 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.54■□□□□ 0.08
HTR1EP28566 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.54■□□□□ 0.08
HTR1EP28566 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
HTR1EP28566 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.54■□□□□ 0.08
HTR1EP28566 MKNK2P1-201ENST00000437526 628 ntBASIC15.54■□□□□ 0.08
HTR1EP28566 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.54■□□□□ 0.08
HTR1EP28566 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.54■□□□□ 0.08
HTR1EP28566 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.54■□□□□ 0.08
HTR1EP28566 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.54■□□□□ 0.08
HTR1EP28566 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.54■□□□□ 0.08
HTR1EP28566 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
HTR1EP28566 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.54■□□□□ 0.08
HTR1EP28566 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
HTR1EP28566 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.54■□□□□ 0.08
HTR1EP28566 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.54■□□□□ 0.08
HTR1EP28566 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
HTR1EP28566 AL078644.1-201ENST00000609881 752 ntBASIC15.54■□□□□ 0.08
HTR1EP28566 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
HTR1EP28566 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
HTR1EP28566 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HTR1EP28566 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HTR1EP28566 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.54■□□□□ 0.08
HTR1EP28566 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HTR1EP28566 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HTR1EP28566 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HTR1EP28566 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HTR1EP28566 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.54■□□□□ 0.08
HTR1EP28566 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.53■□□□□ 0.08
HTR1EP28566 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.53■□□□□ 0.08
HTR1EP28566 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.53■□□□□ 0.08
HTR1EP28566 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HTR1EP28566 AL353732.1-201ENST00000569618 1459 ntBASIC15.53■□□□□ 0.08
HTR1EP28566 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
HTR1EP28566 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HTR1EP28566 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HTR1EP28566 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HTR1EP28566 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HTR1EP28566 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms