Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.36■□□□□ 0.21
HLA-DPA1P20036 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DPA1P20036 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.35■□□□□ 0.21
HLA-DPA1P20036 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
HLA-DPA1P20036 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.35■□□□□ 0.21
HLA-DPA1P20036 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DPA1P20036 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DPA1P20036 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
HLA-DPA1P20036 AC008677.1-201ENST00000519230 1561 ntBASIC16.35■□□□□ 0.21
HLA-DPA1P20036 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.35■□□□□ 0.21
HLA-DPA1P20036 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
HLA-DPA1P20036 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DPA1P20036 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
HLA-DPA1P20036 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
HLA-DPA1P20036 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DPA1P20036 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.35■□□□□ 0.21
HLA-DPA1P20036 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.35■□□□□ 0.21
HLA-DPA1P20036 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DPA1P20036 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DPA1P20036 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.35■□□□□ 0.21
HLA-DPA1P20036 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DPA1P20036 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DPA1P20036 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.35■□□□□ 0.21
HLA-DPA1P20036 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DPA1P20036 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.35■□□□□ 0.21
HLA-DPA1P20036 AC004461.1-201ENST00000412461 403 ntBASIC16.35■□□□□ 0.21
HLA-DPA1P20036 AC211486.1-202ENST00000416371 468 ntBASIC16.35■□□□□ 0.21
HLA-DPA1P20036 AC005237.2-201ENST00000434368 219 ntBASIC16.35■□□□□ 0.21
HLA-DPA1P20036 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DPA1P20036 AC211476.1-201ENST00000503899 468 ntBASIC16.35■□□□□ 0.21
HLA-DPA1P20036 RNA5SP410-201ENST00000516285 106 ntBASIC16.35■□□□□ 0.21
HLA-DPA1P20036 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DPA1P20036 SLC25A39P2-201ENST00000537614 270 ntBASIC16.35■□□□□ 0.21
HLA-DPA1P20036 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.35■□□□□ 0.21
HLA-DPA1P20036 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.35■□□□□ 0.21
HLA-DPA1P20036 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DPA1P20036 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.35■□□□□ 0.21
HLA-DPA1P20036 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DPA1P20036 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
HLA-DPA1P20036 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.35■□□□□ 0.21
HLA-DPA1P20036 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
HLA-DPA1P20036 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DPA1P20036 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.35■□□□□ 0.21
HLA-DPA1P20036 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DPA1P20036 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
HLA-DPA1P20036 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DPA1P20036 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DPA1P20036 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DPA1P20036 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DPA1P20036 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.35■□□□□ 0.21
HLA-DPA1P20036 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DPA1P20036 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DPA1P20036 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DPA1P20036 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DPA1P20036 LINC02447-202ENST00000501888 2146 ntBASIC16.34■□□□□ 0.21
HLA-DPA1P20036 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DPA1P20036 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DPA1P20036 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.34■□□□□ 0.21
HLA-DPA1P20036 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DPA1P20036 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.34■□□□□ 0.21
HLA-DPA1P20036 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DPA1P20036 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.34■□□□□ 0.21
HLA-DPA1P20036 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.34■□□□□ 0.21
HLA-DPA1P20036 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.34■□□□□ 0.21
HLA-DPA1P20036 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.34■□□□□ 0.21
HLA-DPA1P20036 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.34■□□□□ 0.21
HLA-DPA1P20036 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DPA1P20036 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.34■□□□□ 0.21
HLA-DPA1P20036 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.34■□□□□ 0.21
HLA-DPA1P20036 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.34■□□□□ 0.21
HLA-DPA1P20036 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.34■□□□□ 0.21
HLA-DPA1P20036 AC004835.2-201ENST00000603762 682 ntBASIC16.34■□□□□ 0.21
HLA-DPA1P20036 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.34■□□□□ 0.21
HLA-DPA1P20036 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
HLA-DPA1P20036 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.34■□□□□ 0.21
HLA-DPA1P20036 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DPA1P20036 AL365203.3-201ENST00000609742 2057 ntBASIC16.34■□□□□ 0.21
HLA-DPA1P20036 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DPA1P20036 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DPA1P20036 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DPA1P20036 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DPA1P20036 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DPA1P20036 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DPA1P20036 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.34■□□□□ 0.21
HLA-DPA1P20036 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DPA1P20036 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
HLA-DPA1P20036 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
HLA-DPA1P20036 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
HLA-DPA1P20036 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.33■□□□□ 0.21
HLA-DPA1P20036 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
HLA-DPA1P20036 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
HLA-DPA1P20036 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DPA1P20036 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DPA1P20036 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DPA1P20036 AL627223.1-201ENST00000416693 442 ntBASIC16.33■□□□□ 0.2
HLA-DPA1P20036 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.33■□□□□ 0.2
HLA-DPA1P20036 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.33■□□□□ 0.2
HLA-DPA1P20036 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.33■□□□□ 0.2
HLA-DPA1P20036 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.33■□□□□ 0.2
HLA-DPA1P20036 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms