Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.08■□□□□ 0.32
KRT3P12035 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
KRT3P12035 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
KRT3P12035 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
KRT3P12035 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT3P12035 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.07■□□□□ 0.32
KRT3P12035 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT3P12035 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT3P12035 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT3P12035 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
KRT3P12035 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT3P12035 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
KRT3P12035 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT3P12035 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.07■□□□□ 0.32
KRT3P12035 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT3P12035 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT3P12035 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT3P12035 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT3P12035 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.07■□□□□ 0.32
KRT3P12035 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
KRT3P12035 MIR346-201ENST00000362234 95 ntBASIC17.07■□□□□ 0.32
KRT3P12035 AC142381.1-201ENST00000426099 345 ntBASIC17.07■□□□□ 0.32
KRT3P12035 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.07■□□□□ 0.32
KRT3P12035 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
KRT3P12035 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
KRT3P12035 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.07■□□□□ 0.32
KRT3P12035 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.07■□□□□ 0.32
KRT3P12035 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.07■□□□□ 0.32
KRT3P12035 KRT8P23-201ENST00000560090 1207 ntBASIC17.07■□□□□ 0.32
KRT3P12035 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.07■□□□□ 0.32
KRT3P12035 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.07■□□□□ 0.32
KRT3P12035 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.07■□□□□ 0.32
KRT3P12035 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
KRT3P12035 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.07■□□□□ 0.32
KRT3P12035 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT3P12035 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT3P12035 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
KRT3P12035 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
KRT3P12035 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT3P12035 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
KRT3P12035 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT3P12035 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT3P12035 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
KRT3P12035 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT3P12035 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT3P12035 AC008677.1-201ENST00000519230 1561 ntBASIC17.06■□□□□ 0.32
KRT3P12035 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
KRT3P12035 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
KRT3P12035 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KRT3P12035 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
KRT3P12035 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
KRT3P12035 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
KRT3P12035 PAUPAR-201ENST00000630360 2965 ntBASIC17.06■□□□□ 0.32
KRT3P12035 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.06■□□□□ 0.32
KRT3P12035 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC17.06■□□□□ 0.32
KRT3P12035 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.06■□□□□ 0.32
KRT3P12035 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KRT3P12035 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KRT3P12035 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.06■□□□□ 0.32
KRT3P12035 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KRT3P12035 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.06■□□□□ 0.32
KRT3P12035 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.06■□□□□ 0.32
KRT3P12035 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.06■□□□□ 0.32
KRT3P12035 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.06■□□□□ 0.32
KRT3P12035 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.06■□□□□ 0.32
KRT3P12035 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.06■□□□□ 0.32
KRT3P12035 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.06■□□□□ 0.32
KRT3P12035 AP000842.3-202ENST00000569238 1080 ntBASIC17.06■□□□□ 0.32
KRT3P12035 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.06■□□□□ 0.32
KRT3P12035 AC024267.1-201ENST00000582320 895 ntBASIC17.06■□□□□ 0.32
KRT3P12035 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.06■□□□□ 0.32
KRT3P12035 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.06■□□□□ 0.32
KRT3P12035 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
KRT3P12035 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KRT3P12035 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KRT3P12035 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KRT3P12035 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
KRT3P12035 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
KRT3P12035 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.06■□□□□ 0.32
KRT3P12035 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KRT3P12035 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
KRT3P12035 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.06■□□□□ 0.32
KRT3P12035 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.06■□□□□ 0.32
KRT3P12035 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.06■□□□□ 0.32
KRT3P12035 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KRT3P12035 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
KRT3P12035 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.06■□□□□ 0.32
KRT3P12035 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.06■□□□□ 0.32
KRT3P12035 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.06■□□□□ 0.32
KRT3P12035 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KRT3P12035 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT3P12035 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT3P12035 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
KRT3P12035 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
KRT3P12035 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.05■□□□□ 0.32
KRT3P12035 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.05■□□□□ 0.32
KRT3P12035 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.05■□□□□ 0.32
KRT3P12035 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT3P12035 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT3P12035 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms