Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.31■□□□□ 0.2
THRAP10827 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
THRAP10827 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
THRAP10827 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
THRAP10827 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
THRAP10827 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
THRAP10827 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
THRAP10827 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.3■□□□□ 0.2
THRAP10827 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
THRAP10827 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
THRAP10827 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
THRAP10827 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.3■□□□□ 0.2
THRAP10827 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
THRAP10827 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.3■□□□□ 0.2
THRAP10827 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.3■□□□□ 0.2
THRAP10827 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.3■□□□□ 0.2
THRAP10827 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
THRAP10827 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
THRAP10827 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
THRAP10827 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.3■□□□□ 0.2
THRAP10827 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
THRAP10827 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
THRAP10827 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
THRAP10827 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.3■□□□□ 0.2
THRAP10827 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.3■□□□□ 0.2
THRAP10827 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
THRAP10827 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.3■□□□□ 0.2
THRAP10827 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.3■□□□□ 0.2
THRAP10827 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.3■□□□□ 0.2
THRAP10827 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.3■□□□□ 0.2
THRAP10827 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.3■□□□□ 0.2
THRAP10827 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.3■□□□□ 0.2
THRAP10827 AC005412.3-201ENST00000580309 715 ntBASIC16.3■□□□□ 0.2
THRAP10827 MIR4515-201ENST00000584082 81 ntBASIC16.3■□□□□ 0.2
THRAP10827 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.3■□□□□ 0.2
THRAP10827 AC106028.4-201ENST00000614509 607 ntBASIC16.3■□□□□ 0.2
THRAP10827 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
THRAP10827 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
THRAP10827 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
THRAP10827 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
THRAP10827 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
THRAP10827 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.3■□□□□ 0.2
THRAP10827 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.3■□□□□ 0.2
THRAP10827 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
THRAP10827 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
THRAP10827 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
THRAP10827 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
THRAP10827 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
THRAP10827 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.3■□□□□ 0.2
THRAP10827 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
THRAP10827 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
THRAP10827 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
THRAP10827 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.3■□□□□ 0.2
THRAP10827 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.3■□□□□ 0.2
THRAP10827 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
THRAP10827 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.3■□□□□ 0.2
THRAP10827 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
THRAP10827 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
THRAP10827 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
THRAP10827 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
THRAP10827 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
THRAP10827 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.29■□□□□ 0.2
THRAP10827 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
THRAP10827 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
THRAP10827 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
THRAP10827 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.29■□□□□ 0.2
THRAP10827 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
THRAP10827 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
THRAP10827 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.29■□□□□ 0.2
THRAP10827 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.29■□□□□ 0.2
THRAP10827 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.29■□□□□ 0.2
THRAP10827 TIMM8BP1-201ENST00000452384 211 ntBASIC16.29■□□□□ 0.2
THRAP10827 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.29■□□□□ 0.2
THRAP10827 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.29■□□□□ 0.2
THRAP10827 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
THRAP10827 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.29■□□□□ 0.2
THRAP10827 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.29■□□□□ 0.2
THRAP10827 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.29■□□□□ 0.2
THRAP10827 DUX4L17-201ENST00000557360 1267 ntBASIC16.29■□□□□ 0.2
THRAP10827 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
THRAP10827 AC026120.1-201ENST00000611536 926 ntBASIC16.29■□□□□ 0.2
THRAP10827 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
THRAP10827 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.29■□□□□ 0.2
THRAP10827 AL139011.1-202ENST00000642063 584 ntBASIC16.29■□□□□ 0.2
THRAP10827 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
THRAP10827 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.29■□□□□ 0.2
THRAP10827 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
THRAP10827 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
THRAP10827 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
THRAP10827 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
THRAP10827 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
THRAP10827 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
THRAP10827 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
THRAP10827 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
THRAP10827 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.28■□□□□ 0.2
THRAP10827 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
THRAP10827 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.28■□□□□ 0.2
THRAP10827 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
THRAP10827 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
THRAP10827 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms