Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
LTN1O94822 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
LTN1O94822 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC21.02■□□□□ 0.96
LTN1O94822 YBX1P6-201ENST00000442962 1002 ntBASIC21.02■□□□□ 0.96
LTN1O94822 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC21.02■□□□□ 0.96
LTN1O94822 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC21.02■□□□□ 0.96
LTN1O94822 AP001582.1-201ENST00000525856 295 ntBASIC21.02■□□□□ 0.96
LTN1O94822 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC21.02■□□□□ 0.96
LTN1O94822 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LTN1O94822 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
LTN1O94822 AGGF1P2-201ENST00000426656 2106 ntBASIC21.02■□□□□ 0.96
LTN1O94822 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LTN1O94822 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
LTN1O94822 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
LTN1O94822 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
LTN1O94822 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LTN1O94822 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LTN1O94822 ACTBP8-201ENST00000403258 1108 ntBASIC21.02■□□□□ 0.96
LTN1O94822 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC21.02■□□□□ 0.96
LTN1O94822 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC21.02■□□□□ 0.96
LTN1O94822 CD74-212ENST00000524315 584 ntTSL 5 BASIC21.02■□□□□ 0.96
LTN1O94822 GPX4-206ENST00000588919 803 ntTSL 2 BASIC21.02■□□□□ 0.96
LTN1O94822 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LTN1O94822 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LTN1O94822 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC21.02■□□□□ 0.96
LTN1O94822 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LTN1O94822 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
LTN1O94822 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
LTN1O94822 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
LTN1O94822 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LTN1O94822 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LTN1O94822 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LTN1O94822 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LTN1O94822 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LTN1O94822 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LTN1O94822 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LTN1O94822 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LTN1O94822 AC007551.1-201ENST00000457394 519 ntBASIC21.01■□□□□ 0.95
LTN1O94822 RPL8-205ENST00000527914 551 ntTSL 3 BASIC21.01■□□□□ 0.95
LTN1O94822 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC21.01■□□□□ 0.95
LTN1O94822 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC21.01■□□□□ 0.95
LTN1O94822 AC005695.3-201ENST00000614522 232 ntBASIC21.01■□□□□ 0.95
LTN1O94822 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
LTN1O94822 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
LTN1O94822 HARS-202ENST00000415192 1401 ntTSL 2 BASIC21.01■□□□□ 0.95
LTN1O94822 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LTN1O94822 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LTN1O94822 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC21.01■□□□□ 0.95
LTN1O94822 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LTN1O94822 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
LTN1O94822 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC21.01■□□□□ 0.95
LTN1O94822 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LTN1O94822 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LTN1O94822 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
LTN1O94822 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LTN1O94822 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LTN1O94822 FLII-221ENST00000578558 2377 ntTSL 5 BASIC21■□□□□ 0.95
LTN1O94822 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21■□□□□ 0.95
LTN1O94822 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC21■□□□□ 0.95
LTN1O94822 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
LTN1O94822 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC21■□□□□ 0.95
LTN1O94822 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
LTN1O94822 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC21■□□□□ 0.95
LTN1O94822 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC21■□□□□ 0.95
LTN1O94822 LARP4-220ENST00000615080 856 ntTSL 5 BASIC21■□□□□ 0.95
LTN1O94822 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
LTN1O94822 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC21■□□□□ 0.95
LTN1O94822 TK1-203ENST00000588734 1681 ntTSL 2 BASIC21■□□□□ 0.95
LTN1O94822 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC21■□□□□ 0.95
LTN1O94822 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
LTN1O94822 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC21■□□□□ 0.95
LTN1O94822 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC21■□□□□ 0.95
LTN1O94822 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LTN1O94822 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC21■□□□□ 0.95
LTN1O94822 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LTN1O94822 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LTN1O94822 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC21■□□□□ 0.95
LTN1O94822 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC21■□□□□ 0.95
LTN1O94822 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC21■□□□□ 0.95
LTN1O94822 AC006033.1-201ENST00000440505 426 ntBASIC21■□□□□ 0.95
LTN1O94822 AC245100.3-201ENST00000441281 285 ntBASIC21■□□□□ 0.95
LTN1O94822 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC21■□□□□ 0.95
LTN1O94822 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC21■□□□□ 0.95
LTN1O94822 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC21■□□□□ 0.95
LTN1O94822 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC21■□□□□ 0.95
LTN1O94822 KLK3-211ENST00000597483 810 ntTSL 2 BASIC21■□□□□ 0.95
LTN1O94822 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
LTN1O94822 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LTN1O94822 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LTN1O94822 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
LTN1O94822 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LTN1O94822 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
LTN1O94822 LOX-206ENST00000639739 1626 ntTSL 5 BASIC20.99■□□□□ 0.95
LTN1O94822 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
LTN1O94822 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LTN1O94822 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
LTN1O94822 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
LTN1O94822 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
LTN1O94822 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LTN1O94822 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms