Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHB7Q9Y5E2 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.32■□□□□ 0.36
PCDHB7Q9Y5E2 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHB7Q9Y5E2 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHB7Q9Y5E2 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHB7Q9Y5E2 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDHB7Q9Y5E2 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHB7Q9Y5E2 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDHB7Q9Y5E2 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PCDHB7Q9Y5E2 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PCDHB7Q9Y5E2 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHB7Q9Y5E2 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHB7Q9Y5E2 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHB7Q9Y5E2 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHB7Q9Y5E2 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB7Q9Y5E2 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB7Q9Y5E2 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB7Q9Y5E2 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB7Q9Y5E2 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDHB7Q9Y5E2 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB7Q9Y5E2 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB7Q9Y5E2 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB7Q9Y5E2 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB7Q9Y5E2 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDHB7Q9Y5E2 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PCDHB7Q9Y5E2 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB7Q9Y5E2 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
PCDHB7Q9Y5E2 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB7Q9Y5E2 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB7Q9Y5E2 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC17.31■□□□□ 0.36
PCDHB7Q9Y5E2 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDHB7Q9Y5E2 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC17.31■□□□□ 0.36
PCDHB7Q9Y5E2 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PCDHB7Q9Y5E2 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC17.31■□□□□ 0.36
PCDHB7Q9Y5E2 AC010319.3-201ENST00000597028 470 ntBASIC17.31■□□□□ 0.36
PCDHB7Q9Y5E2 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
PCDHB7Q9Y5E2 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.31■□□□□ 0.36
PCDHB7Q9Y5E2 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.31■□□□□ 0.36
PCDHB7Q9Y5E2 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB7Q9Y5E2 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PCDHB7Q9Y5E2 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB7Q9Y5E2 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB7Q9Y5E2 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB7Q9Y5E2 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.31■□□□□ 0.36
PCDHB7Q9Y5E2 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
PCDHB7Q9Y5E2 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB7Q9Y5E2 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB7Q9Y5E2 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB7Q9Y5E2 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHB7Q9Y5E2 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB7Q9Y5E2 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHB7Q9Y5E2 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB7Q9Y5E2 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB7Q9Y5E2 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB7Q9Y5E2 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
PCDHB7Q9Y5E2 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB7Q9Y5E2 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB7Q9Y5E2 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB7Q9Y5E2 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB7Q9Y5E2 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB7Q9Y5E2 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB7Q9Y5E2 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC17.3■□□□□ 0.36
PCDHB7Q9Y5E2 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHB7Q9Y5E2 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
PCDHB7Q9Y5E2 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
PCDHB7Q9Y5E2 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB7Q9Y5E2 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC17.3■□□□□ 0.36
PCDHB7Q9Y5E2 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC17.3■□□□□ 0.36
PCDHB7Q9Y5E2 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC17.3■□□□□ 0.36
PCDHB7Q9Y5E2 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHB7Q9Y5E2 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB7Q9Y5E2 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHB7Q9Y5E2 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC17.3■□□□□ 0.36
PCDHB7Q9Y5E2 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.3■□□□□ 0.36
PCDHB7Q9Y5E2 AP005482.1-201ENST00000563722 1273 ntBASIC17.3■□□□□ 0.36
PCDHB7Q9Y5E2 PAM16-204ENST00000571941 674 ntTSL 3 BASIC17.3■□□□□ 0.36
PCDHB7Q9Y5E2 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB7Q9Y5E2 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHB7Q9Y5E2 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB7Q9Y5E2 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB7Q9Y5E2 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB7Q9Y5E2 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB7Q9Y5E2 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB7Q9Y5E2 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB7Q9Y5E2 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
PCDHB7Q9Y5E2 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB7Q9Y5E2 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PCDHB7Q9Y5E2 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.3■□□□□ 0.36
PCDHB7Q9Y5E2 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB7Q9Y5E2 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
PCDHB7Q9Y5E2 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHB7Q9Y5E2 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB7Q9Y5E2 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB7Q9Y5E2 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB7Q9Y5E2 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB7Q9Y5E2 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB7Q9Y5E2 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB7Q9Y5E2 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB7Q9Y5E2 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHB7Q9Y5E2 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms