Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC13.54□□□□□ -0.24
LIN7CQ9NUP9 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC13.54□□□□□ -0.24
LIN7CQ9NUP9 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC13.54□□□□□ -0.24
LIN7CQ9NUP9 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC13.54□□□□□ -0.24
LIN7CQ9NUP9 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
LIN7CQ9NUP9 AC106730.1-201ENST00000566722 1090 ntBASIC13.54□□□□□ -0.24
LIN7CQ9NUP9 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC13.54□□□□□ -0.24
LIN7CQ9NUP9 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
LIN7CQ9NUP9 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LIN7CQ9NUP9 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LIN7CQ9NUP9 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
LIN7CQ9NUP9 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LIN7CQ9NUP9 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC13.54□□□□□ -0.24
LIN7CQ9NUP9 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
LIN7CQ9NUP9 LINC00554-201ENST00000564841 3011 ntBASIC13.54□□□□□ -0.24
LIN7CQ9NUP9 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.54□□□□□ -0.24
LIN7CQ9NUP9 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC13.54□□□□□ -0.24
LIN7CQ9NUP9 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LIN7CQ9NUP9 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LIN7CQ9NUP9 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
LIN7CQ9NUP9 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC13.54□□□□□ -0.24
LIN7CQ9NUP9 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LIN7CQ9NUP9 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC13.54□□□□□ -0.24
LIN7CQ9NUP9 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC13.54□□□□□ -0.24
LIN7CQ9NUP9 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LIN7CQ9NUP9 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LIN7CQ9NUP9 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC13.54□□□□□ -0.24
LIN7CQ9NUP9 AC126177.1-201ENST00000547829 2218 ntBASIC13.54□□□□□ -0.24
LIN7CQ9NUP9 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LIN7CQ9NUP9 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LIN7CQ9NUP9 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC13.53□□□□□ -0.24
LIN7CQ9NUP9 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC13.53□□□□□ -0.24
LIN7CQ9NUP9 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
LIN7CQ9NUP9 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LIN7CQ9NUP9 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
LIN7CQ9NUP9 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LIN7CQ9NUP9 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LIN7CQ9NUP9 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LIN7CQ9NUP9 PMS2P1-201ENST00000431037 1228 ntBASIC13.53□□□□□ -0.24
LIN7CQ9NUP9 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LIN7CQ9NUP9 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
LIN7CQ9NUP9 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
LIN7CQ9NUP9 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC13.53□□□□□ -0.24
LIN7CQ9NUP9 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC13.53□□□□□ -0.24
LIN7CQ9NUP9 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LIN7CQ9NUP9 RPL18-209ENST00000550645 463 ntTSL 5 BASIC13.53□□□□□ -0.24
LIN7CQ9NUP9 CD63-210ENST00000550776 870 ntTSL 5 BASIC13.53□□□□□ -0.24
LIN7CQ9NUP9 RPL18-214ENST00000552588 559 ntTSL 3 BASIC13.53□□□□□ -0.24
LIN7CQ9NUP9 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
LIN7CQ9NUP9 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LIN7CQ9NUP9 BSG-214ENST00000614867 960 ntTSL 3 BASIC13.53□□□□□ -0.24
LIN7CQ9NUP9 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC13.53□□□□□ -0.24
LIN7CQ9NUP9 AC004790.2-201ENST00000623588 572 ntBASIC13.53□□□□□ -0.24
LIN7CQ9NUP9 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC13.53□□□□□ -0.24
LIN7CQ9NUP9 AC129492.6-201ENST00000611383 1305 ntBASIC13.53□□□□□ -0.24
LIN7CQ9NUP9 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LIN7CQ9NUP9 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.53□□□□□ -0.24
LIN7CQ9NUP9 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LIN7CQ9NUP9 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.53□□□□□ -0.24
LIN7CQ9NUP9 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LIN7CQ9NUP9 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
LIN7CQ9NUP9 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LIN7CQ9NUP9 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LIN7CQ9NUP9 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC13.53□□□□□ -0.24
LIN7CQ9NUP9 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC13.53□□□□□ -0.24
LIN7CQ9NUP9 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
LIN7CQ9NUP9 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LIN7CQ9NUP9 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
LIN7CQ9NUP9 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LIN7CQ9NUP9 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LIN7CQ9NUP9 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LIN7CQ9NUP9 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LIN7CQ9NUP9 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LIN7CQ9NUP9 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
LIN7CQ9NUP9 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
LIN7CQ9NUP9 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LIN7CQ9NUP9 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LIN7CQ9NUP9 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
LIN7CQ9NUP9 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
LIN7CQ9NUP9 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LIN7CQ9NUP9 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
LIN7CQ9NUP9 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC13.52□□□□□ -0.24
LIN7CQ9NUP9 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC13.52□□□□□ -0.24
LIN7CQ9NUP9 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
LIN7CQ9NUP9 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.52□□□□□ -0.24
LIN7CQ9NUP9 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LIN7CQ9NUP9 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
LIN7CQ9NUP9 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LIN7CQ9NUP9 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC13.52□□□□□ -0.24
LIN7CQ9NUP9 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
LIN7CQ9NUP9 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.52□□□□□ -0.24
LIN7CQ9NUP9 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LIN7CQ9NUP9 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LIN7CQ9NUP9 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LIN7CQ9NUP9 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
LIN7CQ9NUP9 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
LIN7CQ9NUP9 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC13.52□□□□□ -0.25
LIN7CQ9NUP9 CRCP-205ENST00000431089 942 ntTSL 2 BASIC13.52□□□□□ -0.25
LIN7CQ9NUP9 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC13.52□□□□□ -0.25
LIN7CQ9NUP9 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms