Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
UBQLN3Q9H347 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ 0
UBQLN3Q9H347 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
UBQLN3Q9H347 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
UBQLN3Q9H347 AC010491.1-201ENST00000563101 2797 ntBASIC15.05■□□□□ 0
UBQLN3Q9H347 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.05■□□□□ -0
UBQLN3Q9H347 MIR346-201ENST00000362234 95 ntBASIC15.05■□□□□ -0
UBQLN3Q9H347 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
UBQLN3Q9H347 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.05■□□□□ -0
UBQLN3Q9H347 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.05■□□□□ -0
UBQLN3Q9H347 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.05■□□□□ -0
UBQLN3Q9H347 FAM58DP-201ENST00000428076 619 ntBASIC15.05■□□□□ -0
UBQLN3Q9H347 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.05■□□□□ -0
UBQLN3Q9H347 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.05■□□□□ -0
UBQLN3Q9H347 KRT18P34-201ENST00000488218 1270 ntBASIC15.05■□□□□ -0
UBQLN3Q9H347 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.05■□□□□ -0
UBQLN3Q9H347 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.05■□□□□ -0
UBQLN3Q9H347 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
UBQLN3Q9H347 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.05■□□□□ -0
UBQLN3Q9H347 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
UBQLN3Q9H347 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.05■□□□□ -0
UBQLN3Q9H347 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
UBQLN3Q9H347 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
UBQLN3Q9H347 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.05■□□□□ -0
UBQLN3Q9H347 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.05■□□□□ -0
UBQLN3Q9H347 GPAA1P2-202ENST00000606848 1787 ntBASIC15.05■□□□□ -0
UBQLN3Q9H347 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
UBQLN3Q9H347 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
UBQLN3Q9H347 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.05■□□□□ -0
UBQLN3Q9H347 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.05■□□□□ -0
UBQLN3Q9H347 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.05■□□□□ -0
UBQLN3Q9H347 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
UBQLN3Q9H347 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
UBQLN3Q9H347 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.05■□□□□ -0
UBQLN3Q9H347 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
UBQLN3Q9H347 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
UBQLN3Q9H347 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.04■□□□□ -0
UBQLN3Q9H347 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.04■□□□□ -0
UBQLN3Q9H347 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
UBQLN3Q9H347 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
UBQLN3Q9H347 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
UBQLN3Q9H347 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.04■□□□□ -0
UBQLN3Q9H347 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.04■□□□□ -0
UBQLN3Q9H347 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
UBQLN3Q9H347 PCGF3-213ENST00000620529 1899 ntBASIC15.04■□□□□ -0
UBQLN3Q9H347 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.04■□□□□ -0
UBQLN3Q9H347 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
UBQLN3Q9H347 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
UBQLN3Q9H347 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
UBQLN3Q9H347 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
UBQLN3Q9H347 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.04■□□□□ -0
UBQLN3Q9H347 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
UBQLN3Q9H347 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.04■□□□□ -0
UBQLN3Q9H347 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.04■□□□□ -0
UBQLN3Q9H347 GPS2P2-201ENST00000430745 888 ntBASIC15.04■□□□□ -0
UBQLN3Q9H347 IGHV3-62-201ENST00000520057 340 ntBASIC15.04■□□□□ -0
UBQLN3Q9H347 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.04■□□□□ -0
UBQLN3Q9H347 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.04■□□□□ -0
UBQLN3Q9H347 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
UBQLN3Q9H347 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.04■□□□□ -0
UBQLN3Q9H347 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.04■□□□□ -0
UBQLN3Q9H347 AC027307.2-201ENST00000591252 911 ntBASIC15.04■□□□□ -0
UBQLN3Q9H347 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.04■□□□□ -0
UBQLN3Q9H347 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
UBQLN3Q9H347 HYMAI-201ENST00000635591 3347 ntBASIC15.04■□□□□ -0
UBQLN3Q9H347 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
UBQLN3Q9H347 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
UBQLN3Q9H347 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
UBQLN3Q9H347 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
UBQLN3Q9H347 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
UBQLN3Q9H347 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.04■□□□□ -0
UBQLN3Q9H347 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.04■□□□□ -0
UBQLN3Q9H347 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.04■□□□□ -0
UBQLN3Q9H347 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UBQLN3Q9H347 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
UBQLN3Q9H347 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.03■□□□□ -0
UBQLN3Q9H347 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
UBQLN3Q9H347 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.03■□□□□ -0
UBQLN3Q9H347 LINC01144-201ENST00000626198 1710 ntBASIC15.03■□□□□ -0
UBQLN3Q9H347 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.03■□□□□ -0
UBQLN3Q9H347 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.03■□□□□ -0
UBQLN3Q9H347 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.03■□□□□ -0
UBQLN3Q9H347 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.03■□□□□ -0
UBQLN3Q9H347 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.03■□□□□ -0
UBQLN3Q9H347 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.03■□□□□ -0
UBQLN3Q9H347 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.03■□□□□ -0
UBQLN3Q9H347 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UBQLN3Q9H347 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.03■□□□□ -0
UBQLN3Q9H347 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.03■□□□□ -0
UBQLN3Q9H347 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.03■□□□□ -0
UBQLN3Q9H347 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UBQLN3Q9H347 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UBQLN3Q9H347 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
UBQLN3Q9H347 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.03■□□□□ -0
UBQLN3Q9H347 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.03■□□□□ -0
UBQLN3Q9H347 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UBQLN3Q9H347 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.03■□□□□ -0
UBQLN3Q9H347 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UBQLN3Q9H347 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.03■□□□□ -0
UBQLN3Q9H347 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms