Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COMMD4Q9H0A8 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
COMMD4Q9H0A8 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
COMMD4Q9H0A8 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
COMMD4Q9H0A8 AC012569.1-201ENST00000591191 1524 ntBASIC14.38□□□□□ -0.11
COMMD4Q9H0A8 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COMMD4Q9H0A8 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
COMMD4Q9H0A8 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
COMMD4Q9H0A8 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
COMMD4Q9H0A8 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COMMD4Q9H0A8 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.38□□□□□ -0.11
COMMD4Q9H0A8 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14.38□□□□□ -0.11
COMMD4Q9H0A8 HCG4P8-203ENST00000443049 980 ntBASIC14.38□□□□□ -0.11
COMMD4Q9H0A8 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC14.38□□□□□ -0.11
COMMD4Q9H0A8 AL160237.2-201ENST00000556165 472 ntBASIC14.38□□□□□ -0.11
COMMD4Q9H0A8 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.38□□□□□ -0.11
COMMD4Q9H0A8 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
COMMD4Q9H0A8 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC14.38□□□□□ -0.11
COMMD4Q9H0A8 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.38□□□□□ -0.11
COMMD4Q9H0A8 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COMMD4Q9H0A8 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
COMMD4Q9H0A8 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COMMD4Q9H0A8 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
COMMD4Q9H0A8 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COMMD4Q9H0A8 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
COMMD4Q9H0A8 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COMMD4Q9H0A8 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COMMD4Q9H0A8 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
COMMD4Q9H0A8 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
COMMD4Q9H0A8 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC14.38□□□□□ -0.11
COMMD4Q9H0A8 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
COMMD4Q9H0A8 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COMMD4Q9H0A8 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
COMMD4Q9H0A8 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
COMMD4Q9H0A8 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COMMD4Q9H0A8 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COMMD4Q9H0A8 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COMMD4Q9H0A8 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COMMD4Q9H0A8 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COMMD4Q9H0A8 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.37□□□□□ -0.11
COMMD4Q9H0A8 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COMMD4Q9H0A8 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.37□□□□□ -0.11
COMMD4Q9H0A8 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COMMD4Q9H0A8 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
COMMD4Q9H0A8 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC14.37□□□□□ -0.11
COMMD4Q9H0A8 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC14.37□□□□□ -0.11
COMMD4Q9H0A8 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
COMMD4Q9H0A8 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
COMMD4Q9H0A8 KRT18P31-201ENST00000506277 1292 ntBASIC14.37□□□□□ -0.11
COMMD4Q9H0A8 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.37□□□□□ -0.11
COMMD4Q9H0A8 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.37□□□□□ -0.11
COMMD4Q9H0A8 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC14.37□□□□□ -0.11
COMMD4Q9H0A8 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.37□□□□□ -0.11
COMMD4Q9H0A8 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
COMMD4Q9H0A8 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
COMMD4Q9H0A8 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COMMD4Q9H0A8 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
COMMD4Q9H0A8 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.37□□□□□ -0.11
COMMD4Q9H0A8 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
COMMD4Q9H0A8 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
COMMD4Q9H0A8 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
COMMD4Q9H0A8 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
COMMD4Q9H0A8 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COMMD4Q9H0A8 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COMMD4Q9H0A8 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.37□□□□□ -0.11
COMMD4Q9H0A8 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
COMMD4Q9H0A8 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COMMD4Q9H0A8 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
COMMD4Q9H0A8 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
COMMD4Q9H0A8 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
COMMD4Q9H0A8 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COMMD4Q9H0A8 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
COMMD4Q9H0A8 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COMMD4Q9H0A8 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
COMMD4Q9H0A8 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.36□□□□□ -0.11
COMMD4Q9H0A8 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COMMD4Q9H0A8 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
COMMD4Q9H0A8 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COMMD4Q9H0A8 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC14.36□□□□□ -0.11
COMMD4Q9H0A8 TSPY19P-201ENST00000418461 509 ntBASIC14.36□□□□□ -0.11
COMMD4Q9H0A8 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
COMMD4Q9H0A8 TSPY18P-201ENST00000441642 509 ntBASIC14.36□□□□□ -0.11
COMMD4Q9H0A8 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC14.36□□□□□ -0.11
COMMD4Q9H0A8 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
COMMD4Q9H0A8 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
COMMD4Q9H0A8 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.36□□□□□ -0.11
COMMD4Q9H0A8 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
COMMD4Q9H0A8 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC14.36□□□□□ -0.11
COMMD4Q9H0A8 AC021097.1-201ENST00000607902 574 ntBASIC14.36□□□□□ -0.11
COMMD4Q9H0A8 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COMMD4Q9H0A8 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COMMD4Q9H0A8 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COMMD4Q9H0A8 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
COMMD4Q9H0A8 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
COMMD4Q9H0A8 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COMMD4Q9H0A8 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COMMD4Q9H0A8 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
COMMD4Q9H0A8 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COMMD4Q9H0A8 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
COMMD4Q9H0A8 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms