Protein–RNA interactions for Protein: Q9BW85

CCDC94, Coiled-coil domain-containing protein 94, humanhuman

Predicted RBP Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC94Q9BW85 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC94Q9BW85 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CCDC94Q9BW85 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
CCDC94Q9BW85 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC94Q9BW85 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC94Q9BW85 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CCDC94Q9BW85 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CCDC94Q9BW85 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC94Q9BW85 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC18.42■□□□□ 0.54
CCDC94Q9BW85 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC94Q9BW85 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC94Q9BW85 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC94Q9BW85 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC94Q9BW85 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC94Q9BW85 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC94Q9BW85 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC94Q9BW85 DDT-204ENST00000404092 805 ntTSL 3 BASIC18.42■□□□□ 0.54
CCDC94Q9BW85 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC94Q9BW85 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC94Q9BW85 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.42■□□□□ 0.54
CCDC94Q9BW85 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.42■□□□□ 0.54
CCDC94Q9BW85 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.42■□□□□ 0.54
CCDC94Q9BW85 AC068137.2-201ENST00000605408 478 ntBASIC18.42■□□□□ 0.54
CCDC94Q9BW85 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC94Q9BW85 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CCDC94Q9BW85 GRK6P1-201ENST00000400595 1711 ntBASIC18.42■□□□□ 0.54
CCDC94Q9BW85 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC94Q9BW85 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC94Q9BW85 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.42■□□□□ 0.54
CCDC94Q9BW85 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC94Q9BW85 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC94Q9BW85 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC94Q9BW85 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC94Q9BW85 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC94Q9BW85 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC94Q9BW85 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
CCDC94Q9BW85 TOP3BP1-201ENST00000420768 1380 ntBASIC18.42■□□□□ 0.54
CCDC94Q9BW85 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
CCDC94Q9BW85 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.41■□□□□ 0.54
CCDC94Q9BW85 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC94Q9BW85 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC94Q9BW85 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC94Q9BW85 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC94Q9BW85 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC94Q9BW85 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC94Q9BW85 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC94Q9BW85 ALG1L5P-201ENST00000482043 771 ntBASIC18.41■□□□□ 0.54
CCDC94Q9BW85 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.41■□□□□ 0.54
CCDC94Q9BW85 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC94Q9BW85 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.41■□□□□ 0.54
CCDC94Q9BW85 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CCDC94Q9BW85 AC124947.2-201ENST00000547118 1133 ntBASIC18.41■□□□□ 0.54
CCDC94Q9BW85 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.41■□□□□ 0.54
CCDC94Q9BW85 AL078644.1-201ENST00000609881 752 ntBASIC18.41■□□□□ 0.54
CCDC94Q9BW85 AL691403.2-201ENST00000618460 490 ntBASIC18.41■□□□□ 0.54
CCDC94Q9BW85 AC055717.3-201ENST00000622967 595 ntBASIC18.41■□□□□ 0.54
CCDC94Q9BW85 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CCDC94Q9BW85 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC94Q9BW85 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC94Q9BW85 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC94Q9BW85 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC94Q9BW85 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC94Q9BW85 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC94Q9BW85 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC94Q9BW85 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC94Q9BW85 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CCDC94Q9BW85 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC94Q9BW85 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC94Q9BW85 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC94Q9BW85 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC94Q9BW85 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC94Q9BW85 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC94Q9BW85 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CCDC94Q9BW85 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC94Q9BW85 AL353732.1-201ENST00000569618 1459 ntBASIC18.4■□□□□ 0.54
CCDC94Q9BW85 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CCDC94Q9BW85 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC94Q9BW85 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC94Q9BW85 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC94Q9BW85 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC94Q9BW85 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC94Q9BW85 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC94Q9BW85 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC94Q9BW85 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC94Q9BW85 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC94Q9BW85 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC94Q9BW85 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC94Q9BW85 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC94Q9BW85 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC94Q9BW85 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC94Q9BW85 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC94Q9BW85 FALEC-201ENST00000416894 566 ntTSL 3 BASIC18.4■□□□□ 0.54
CCDC94Q9BW85 HTR5BP-201ENST00000430851 1154 ntBASIC18.4■□□□□ 0.54
CCDC94Q9BW85 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC94Q9BW85 MKNK2P1-201ENST00000437526 628 ntBASIC18.4■□□□□ 0.54
CCDC94Q9BW85 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.4■□□□□ 0.54
CCDC94Q9BW85 NMU-203ENST00000507338 658 ntTSL 3 BASIC18.4■□□□□ 0.54
CCDC94Q9BW85 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC94Q9BW85 RPL28-209ENST00000560055 670 ntTSL 3 BASIC18.4■□□□□ 0.54
CCDC94Q9BW85 AL031432.2-201ENST00000566714 459 ntBASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms