Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNX18Q96RF0 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
SNX18Q96RF0 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SNX18Q96RF0 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.85□□□□□ -0.03
SNX18Q96RF0 AL137784.3-201ENST00000623858 2288 ntBASIC14.85□□□□□ -0.03
SNX18Q96RF0 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SNX18Q96RF0 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
SNX18Q96RF0 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
SNX18Q96RF0 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SNX18Q96RF0 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.84□□□□□ -0.03
SNX18Q96RF0 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SNX18Q96RF0 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SNX18Q96RF0 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SNX18Q96RF0 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SNX18Q96RF0 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.84□□□□□ -0.03
SNX18Q96RF0 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
SNX18Q96RF0 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SNX18Q96RF0 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SNX18Q96RF0 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SNX18Q96RF0 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SNX18Q96RF0 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.84□□□□□ -0.03
SNX18Q96RF0 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.84□□□□□ -0.03
SNX18Q96RF0 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.84□□□□□ -0.03
SNX18Q96RF0 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SNX18Q96RF0 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
SNX18Q96RF0 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.84□□□□□ -0.03
SNX18Q96RF0 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.84□□□□□ -0.03
SNX18Q96RF0 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SNX18Q96RF0 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
SNX18Q96RF0 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC14.84□□□□□ -0.03
SNX18Q96RF0 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
SNX18Q96RF0 POLD2P1-201ENST00000511220 997 ntBASIC14.84□□□□□ -0.03
SNX18Q96RF0 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.84□□□□□ -0.03
SNX18Q96RF0 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.84□□□□□ -0.03
SNX18Q96RF0 AC105339.3-201ENST00000560043 636 ntBASIC14.84□□□□□ -0.03
SNX18Q96RF0 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.84□□□□□ -0.03
SNX18Q96RF0 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.84□□□□□ -0.03
SNX18Q96RF0 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.84□□□□□ -0.03
SNX18Q96RF0 AC006538.3-201ENST00000612495 578 ntBASIC14.84□□□□□ -0.03
SNX18Q96RF0 AC116407.3-201ENST00000623905 1129 ntBASIC14.84□□□□□ -0.03
SNX18Q96RF0 AC117500.6-201ENST00000624871 588 ntBASIC14.84□□□□□ -0.03
SNX18Q96RF0 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC14.84□□□□□ -0.03
SNX18Q96RF0 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SNX18Q96RF0 AC063926.3-201ENST00000624734 5658 ntBASIC14.84□□□□□ -0.03
SNX18Q96RF0 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
SNX18Q96RF0 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SNX18Q96RF0 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SNX18Q96RF0 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SNX18Q96RF0 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SNX18Q96RF0 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.84□□□□□ -0.03
SNX18Q96RF0 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.84□□□□□ -0.03
SNX18Q96RF0 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SNX18Q96RF0 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SNX18Q96RF0 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SNX18Q96RF0 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SNX18Q96RF0 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SNX18Q96RF0 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
SNX18Q96RF0 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SNX18Q96RF0 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SNX18Q96RF0 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SNX18Q96RF0 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.83□□□□□ -0.03
SNX18Q96RF0 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.83□□□□□ -0.03
SNX18Q96RF0 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
SNX18Q96RF0 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.83□□□□□ -0.03
SNX18Q96RF0 AC023908.3-201ENST00000564211 3047 ntBASIC14.83□□□□□ -0.04
SNX18Q96RF0 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SNX18Q96RF0 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SNX18Q96RF0 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.83□□□□□ -0.04
SNX18Q96RF0 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SNX18Q96RF0 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SNX18Q96RF0 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SNX18Q96RF0 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SNX18Q96RF0 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SNX18Q96RF0 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SNX18Q96RF0 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SNX18Q96RF0 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.83□□□□□ -0.04
SNX18Q96RF0 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.83□□□□□ -0.04
SNX18Q96RF0 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.83□□□□□ -0.04
SNX18Q96RF0 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.83□□□□□ -0.04
SNX18Q96RF0 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.83□□□□□ -0.04
SNX18Q96RF0 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.83□□□□□ -0.04
SNX18Q96RF0 AC106730.1-201ENST00000566722 1090 ntBASIC14.83□□□□□ -0.04
SNX18Q96RF0 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SNX18Q96RF0 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.83□□□□□ -0.04
SNX18Q96RF0 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.83□□□□□ -0.04
SNX18Q96RF0 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.83□□□□□ -0.04
SNX18Q96RF0 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SNX18Q96RF0 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SNX18Q96RF0 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SNX18Q96RF0 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SNX18Q96RF0 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SNX18Q96RF0 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.83□□□□□ -0.04
SNX18Q96RF0 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SNX18Q96RF0 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SNX18Q96RF0 ZNF259P1-201ENST00000407656 1365 ntBASIC14.83□□□□□ -0.04
SNX18Q96RF0 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SNX18Q96RF0 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.83□□□□□ -0.04
SNX18Q96RF0 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SNX18Q96RF0 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.83□□□□□ -0.04
SNX18Q96RF0 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms