Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM47Q96LD4 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM47Q96LD4 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
TRIM47Q96LD4 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM47Q96LD4 KRT8P49-201ENST00000604166 1432 ntBASIC18.91■□□□□ 0.62
TRIM47Q96LD4 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM47Q96LD4 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM47Q96LD4 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
TRIM47Q96LD4 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM47Q96LD4 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.91■□□□□ 0.62
TRIM47Q96LD4 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM47Q96LD4 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM47Q96LD4 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.91■□□□□ 0.62
TRIM47Q96LD4 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
TRIM47Q96LD4 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM47Q96LD4 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
TRIM47Q96LD4 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM47Q96LD4 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM47Q96LD4 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM47Q96LD4 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM47Q96LD4 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
TRIM47Q96LD4 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TRIM47Q96LD4 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM47Q96LD4 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
TRIM47Q96LD4 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM47Q96LD4 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC18.91■□□□□ 0.62
TRIM47Q96LD4 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC18.91■□□□□ 0.62
TRIM47Q96LD4 RN7SL618P-201ENST00000477850 296 ntBASIC18.91■□□□□ 0.62
TRIM47Q96LD4 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC18.91■□□□□ 0.62
TRIM47Q96LD4 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
TRIM47Q96LD4 AC092552.1-201ENST00000547243 906 ntBASIC18.91■□□□□ 0.62
TRIM47Q96LD4 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC18.91■□□□□ 0.62
TRIM47Q96LD4 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC18.91■□□□□ 0.62
TRIM47Q96LD4 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM47Q96LD4 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC18.91■□□□□ 0.62
TRIM47Q96LD4 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC18.91■□□□□ 0.62
TRIM47Q96LD4 SNX12-206ENST00000622259 661 ntTSL 5 BASIC18.91■□□□□ 0.62
TRIM47Q96LD4 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC18.91■□□□□ 0.62
TRIM47Q96LD4 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.91■□□□□ 0.62
TRIM47Q96LD4 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM47Q96LD4 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.91■□□□□ 0.62
TRIM47Q96LD4 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM47Q96LD4 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.91■□□□□ 0.62
TRIM47Q96LD4 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM47Q96LD4 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM47Q96LD4 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM47Q96LD4 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC18.91■□□□□ 0.62
TRIM47Q96LD4 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM47Q96LD4 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM47Q96LD4 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM47Q96LD4 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.91■□□□□ 0.62
TRIM47Q96LD4 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.9■□□□□ 0.62
TRIM47Q96LD4 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.9■□□□□ 0.62
TRIM47Q96LD4 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TRIM47Q96LD4 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM47Q96LD4 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC18.9■□□□□ 0.62
TRIM47Q96LD4 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM47Q96LD4 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM47Q96LD4 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.9■□□□□ 0.62
TRIM47Q96LD4 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.9■□□□□ 0.62
TRIM47Q96LD4 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.9■□□□□ 0.62
TRIM47Q96LD4 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM47Q96LD4 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM47Q96LD4 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC18.9■□□□□ 0.62
TRIM47Q96LD4 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC18.9■□□□□ 0.62
TRIM47Q96LD4 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC18.9■□□□□ 0.62
TRIM47Q96LD4 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18.9■□□□□ 0.62
TRIM47Q96LD4 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.9■□□□□ 0.62
TRIM47Q96LD4 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM47Q96LD4 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC18.9■□□□□ 0.62
TRIM47Q96LD4 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC18.9■□□□□ 0.62
TRIM47Q96LD4 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC18.9■□□□□ 0.62
TRIM47Q96LD4 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
TRIM47Q96LD4 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM47Q96LD4 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.9■□□□□ 0.62
TRIM47Q96LD4 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TRIM47Q96LD4 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
TRIM47Q96LD4 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM47Q96LD4 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM47Q96LD4 PCDHB17P-201ENST00000539533 2393 ntBASIC18.9■□□□□ 0.62
TRIM47Q96LD4 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
TRIM47Q96LD4 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
TRIM47Q96LD4 REXO1L6P-201ENST00000603433 1515 ntBASIC18.9■□□□□ 0.62
TRIM47Q96LD4 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
TRIM47Q96LD4 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.62
TRIM47Q96LD4 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
TRIM47Q96LD4 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.89■□□□□ 0.61
TRIM47Q96LD4 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM47Q96LD4 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.89■□□□□ 0.61
TRIM47Q96LD4 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM47Q96LD4 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM47Q96LD4 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM47Q96LD4 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM47Q96LD4 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
TRIM47Q96LD4 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
TRIM47Q96LD4 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM47Q96LD4 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
TRIM47Q96LD4 TMEM14DP-201ENST00000422205 345 ntBASIC18.89■□□□□ 0.61
TRIM47Q96LD4 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
TRIM47Q96LD4 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms