Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.11■□□□□ 0.17
SH3KBP1Q96B97 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SH3KBP1Q96B97 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SH3KBP1Q96B97 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.11■□□□□ 0.17
SH3KBP1Q96B97 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SH3KBP1Q96B97 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
SH3KBP1Q96B97 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
SH3KBP1Q96B97 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.1■□□□□ 0.17
SH3KBP1Q96B97 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SH3KBP1Q96B97 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SH3KBP1Q96B97 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
SH3KBP1Q96B97 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SH3KBP1Q96B97 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SH3KBP1Q96B97 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SH3KBP1Q96B97 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.1■□□□□ 0.17
SH3KBP1Q96B97 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.1■□□□□ 0.17
SH3KBP1Q96B97 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SH3KBP1Q96B97 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SH3KBP1Q96B97 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SH3KBP1Q96B97 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SH3KBP1Q96B97 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SH3KBP1Q96B97 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SH3KBP1Q96B97 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SH3KBP1Q96B97 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.1■□□□□ 0.17
SH3KBP1Q96B97 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.1■□□□□ 0.17
SH3KBP1Q96B97 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SH3KBP1Q96B97 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.1■□□□□ 0.17
SH3KBP1Q96B97 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SH3KBP1Q96B97 SLC25A39P2-201ENST00000537614 270 ntBASIC16.1■□□□□ 0.17
SH3KBP1Q96B97 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.1■□□□□ 0.17
SH3KBP1Q96B97 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.1■□□□□ 0.17
SH3KBP1Q96B97 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.1■□□□□ 0.17
SH3KBP1Q96B97 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.1■□□□□ 0.17
SH3KBP1Q96B97 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SH3KBP1Q96B97 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SH3KBP1Q96B97 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SH3KBP1Q96B97 AC006449.5-201ENST00000610658 2098 ntBASIC16.1■□□□□ 0.17
SH3KBP1Q96B97 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SH3KBP1Q96B97 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SH3KBP1Q96B97 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SH3KBP1Q96B97 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SH3KBP1Q96B97 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SH3KBP1Q96B97 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.1■□□□□ 0.17
SH3KBP1Q96B97 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.1■□□□□ 0.17
SH3KBP1Q96B97 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SH3KBP1Q96B97 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SH3KBP1Q96B97 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SH3KBP1Q96B97 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.1■□□□□ 0.17
SH3KBP1Q96B97 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.1■□□□□ 0.17
SH3KBP1Q96B97 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC16.09■□□□□ 0.17
SH3KBP1Q96B97 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.09■□□□□ 0.17
SH3KBP1Q96B97 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.09■□□□□ 0.17
SH3KBP1Q96B97 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SH3KBP1Q96B97 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SH3KBP1Q96B97 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.09■□□□□ 0.17
SH3KBP1Q96B97 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
SH3KBP1Q96B97 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SH3KBP1Q96B97 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
SH3KBP1Q96B97 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.09■□□□□ 0.17
SH3KBP1Q96B97 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.09■□□□□ 0.17
SH3KBP1Q96B97 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
SH3KBP1Q96B97 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SH3KBP1Q96B97 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.09■□□□□ 0.17
SH3KBP1Q96B97 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SH3KBP1Q96B97 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
SH3KBP1Q96B97 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.09■□□□□ 0.17
SH3KBP1Q96B97 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SH3KBP1Q96B97 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.09■□□□□ 0.17
SH3KBP1Q96B97 GPS2P2-201ENST00000430745 888 ntBASIC16.09■□□□□ 0.17
SH3KBP1Q96B97 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.09■□□□□ 0.17
SH3KBP1Q96B97 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.09■□□□□ 0.17
SH3KBP1Q96B97 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.09■□□□□ 0.17
SH3KBP1Q96B97 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.09■□□□□ 0.17
SH3KBP1Q96B97 ALG1L8P-201ENST00000533887 760 ntBASIC16.09■□□□□ 0.17
SH3KBP1Q96B97 AC026150.2-201ENST00000564693 1156 ntBASIC16.09■□□□□ 0.17
SH3KBP1Q96B97 AC073389.1-201ENST00000595595 795 ntBASIC16.09■□□□□ 0.17
SH3KBP1Q96B97 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SH3KBP1Q96B97 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.09■□□□□ 0.17
SH3KBP1Q96B97 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.09■□□□□ 0.17
SH3KBP1Q96B97 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.09■□□□□ 0.17
SH3KBP1Q96B97 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SH3KBP1Q96B97 TUBB3P1-201ENST00000405796 1332 ntBASIC16.09■□□□□ 0.17
SH3KBP1Q96B97 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.09■□□□□ 0.17
SH3KBP1Q96B97 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SH3KBP1Q96B97 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.09■□□□□ 0.17
SH3KBP1Q96B97 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SH3KBP1Q96B97 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SH3KBP1Q96B97 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.09■□□□□ 0.17
SH3KBP1Q96B97 NORAD-201ENST00000565493 5339 ntBASIC16.09■□□□□ 0.17
SH3KBP1Q96B97 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.09■□□□□ 0.17
SH3KBP1Q96B97 AL031731.1-201ENST00000642131 2094 ntBASIC16.09■□□□□ 0.17
SH3KBP1Q96B97 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
SH3KBP1Q96B97 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
SH3KBP1Q96B97 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
SH3KBP1Q96B97 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
SH3KBP1Q96B97 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
SH3KBP1Q96B97 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SH3KBP1Q96B97 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.09■□□□□ 0.17
SH3KBP1Q96B97 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.09■□□□□ 0.17
SH3KBP1Q96B97 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.08■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms