Protein–RNA interactions for Protein: Q8NB49

ATP11C, Phospholipid-transporting ATPase IG, humanhuman

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP11CQ8NB49 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.96■□□□□ 0.31
ATP11CQ8NB49 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATP11CQ8NB49 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATP11CQ8NB49 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ATP11CQ8NB49 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ATP11CQ8NB49 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATP11CQ8NB49 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
ATP11CQ8NB49 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
ATP11CQ8NB49 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATP11CQ8NB49 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ATP11CQ8NB49 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.96■□□□□ 0.31
ATP11CQ8NB49 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
ATP11CQ8NB49 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.96■□□□□ 0.31
ATP11CQ8NB49 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
ATP11CQ8NB49 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
ATP11CQ8NB49 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
ATP11CQ8NB49 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
ATP11CQ8NB49 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.96■□□□□ 0.3
ATP11CQ8NB49 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
ATP11CQ8NB49 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
ATP11CQ8NB49 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.96■□□□□ 0.3
ATP11CQ8NB49 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
ATP11CQ8NB49 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
ATP11CQ8NB49 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.96■□□□□ 0.3
ATP11CQ8NB49 KRT8P39-201ENST00000396270 1433 ntBASIC16.96■□□□□ 0.3
ATP11CQ8NB49 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
ATP11CQ8NB49 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
ATP11CQ8NB49 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP11CQ8NB49 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ATP11CQ8NB49 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP11CQ8NB49 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
ATP11CQ8NB49 C8orf49-201ENST00000525043 1968 ntBASIC16.95■□□□□ 0.3
ATP11CQ8NB49 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
ATP11CQ8NB49 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP11CQ8NB49 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP11CQ8NB49 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP11CQ8NB49 AC016027.1-202ENST00000607927 1699 ntBASIC16.95■□□□□ 0.3
ATP11CQ8NB49 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP11CQ8NB49 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ATP11CQ8NB49 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
ATP11CQ8NB49 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.95■□□□□ 0.3
ATP11CQ8NB49 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.95■□□□□ 0.3
ATP11CQ8NB49 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.95■□□□□ 0.3
ATP11CQ8NB49 AL592309.1-201ENST00000443127 649 ntBASIC16.95■□□□□ 0.3
ATP11CQ8NB49 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.95■□□□□ 0.3
ATP11CQ8NB49 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
ATP11CQ8NB49 AC079140.1-201ENST00000508039 487 ntBASIC16.95■□□□□ 0.3
ATP11CQ8NB49 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.95■□□□□ 0.3
ATP11CQ8NB49 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.95■□□□□ 0.3
ATP11CQ8NB49 AC243562.1-201ENST00000560672 389 ntBASIC16.95■□□□□ 0.3
ATP11CQ8NB49 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.95■□□□□ 0.3
ATP11CQ8NB49 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP11CQ8NB49 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.95■□□□□ 0.3
ATP11CQ8NB49 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP11CQ8NB49 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP11CQ8NB49 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ATP11CQ8NB49 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP11CQ8NB49 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP11CQ8NB49 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ATP11CQ8NB49 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ATP11CQ8NB49 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ATP11CQ8NB49 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.95■□□□□ 0.3
ATP11CQ8NB49 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.95■□□□□ 0.3
ATP11CQ8NB49 KRT18P28-201ENST00000453838 1332 ntBASIC16.95■□□□□ 0.3
ATP11CQ8NB49 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATP11CQ8NB49 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.94■□□□□ 0.3
ATP11CQ8NB49 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATP11CQ8NB49 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATP11CQ8NB49 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.94■□□□□ 0.3
ATP11CQ8NB49 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
ATP11CQ8NB49 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.94■□□□□ 0.3
ATP11CQ8NB49 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATP11CQ8NB49 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
ATP11CQ8NB49 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.94■□□□□ 0.3
ATP11CQ8NB49 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.94■□□□□ 0.3
ATP11CQ8NB49 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.94■□□□□ 0.3
ATP11CQ8NB49 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ATP11CQ8NB49 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATP11CQ8NB49 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
ATP11CQ8NB49 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.94■□□□□ 0.3
ATP11CQ8NB49 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.94■□□□□ 0.3
ATP11CQ8NB49 AC005237.2-201ENST00000434368 219 ntBASIC16.94■□□□□ 0.3
ATP11CQ8NB49 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATP11CQ8NB49 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.94■□□□□ 0.3
ATP11CQ8NB49 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.94■□□□□ 0.3
ATP11CQ8NB49 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.94■□□□□ 0.3
ATP11CQ8NB49 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.94■□□□□ 0.3
ATP11CQ8NB49 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.94■□□□□ 0.3
ATP11CQ8NB49 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.94■□□□□ 0.3
ATP11CQ8NB49 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATP11CQ8NB49 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ATP11CQ8NB49 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
ATP11CQ8NB49 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATP11CQ8NB49 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.94■□□□□ 0.3
ATP11CQ8NB49 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATP11CQ8NB49 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATP11CQ8NB49 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.94■□□□□ 0.3
ATP11CQ8NB49 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.94■□□□□ 0.3
ATP11CQ8NB49 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
ATP11CQ8NB49 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms