Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HIST1H1AQ02539 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
HIST1H1AQ02539 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC12.5□□□□□ -0.41
HIST1H1AQ02539 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
HIST1H1AQ02539 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
HIST1H1AQ02539 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
HIST1H1AQ02539 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 GGT3P-204ENST00000453783 1664 ntBASIC12.49□□□□□ -0.41
HIST1H1AQ02539 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 AL353732.1-201ENST00000569618 1459 ntBASIC12.49□□□□□ -0.41
HIST1H1AQ02539 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 PC-214ENST00000628663 1470 ntTSL 5 BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 INIP-202ENST00000374236 874 ntTSL 2 BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 BMF-207ENST00000559701 630 ntTSL 3 BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 CYGB-205ENST00000590175 830 ntTSL 3 BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 SIGLEC29P-201ENST00000599873 1114 ntBASIC12.49□□□□□ -0.41
HIST1H1AQ02539 REXO1L3P-201ENST00000622202 1288 ntBASIC12.49□□□□□ -0.41
HIST1H1AQ02539 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
HIST1H1AQ02539 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H1AQ02539 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC12.48□□□□□ -0.41
HIST1H1AQ02539 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H1AQ02539 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
HIST1H1AQ02539 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H1AQ02539 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC12.48□□□□□ -0.41
HIST1H1AQ02539 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC12.48□□□□□ -0.41
HIST1H1AQ02539 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H1AQ02539 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC12.48□□□□□ -0.41
HIST1H1AQ02539 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC12.48□□□□□ -0.41
HIST1H1AQ02539 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H1AQ02539 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
HIST1H1AQ02539 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
HIST1H1AQ02539 KRT8P39-201ENST00000396270 1433 ntBASIC12.48□□□□□ -0.41
HIST1H1AQ02539 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H1AQ02539 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC12.48□□□□□ -0.41
HIST1H1AQ02539 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H1AQ02539 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC12.48□□□□□ -0.41
HIST1H1AQ02539 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H1AQ02539 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H1AQ02539 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms