Protein–RNA interactions for Protein: P68366

TUBA4A, Tubulin alpha-4A chain, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4AP68366 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBA4AP68366 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TUBA4AP68366 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
TUBA4AP68366 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.28■□□□□ 0.04
TUBA4AP68366 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBA4AP68366 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBA4AP68366 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBA4AP68366 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TUBA4AP68366 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBA4AP68366 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.28■□□□□ 0.04
TUBA4AP68366 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBA4AP68366 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBA4AP68366 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.28■□□□□ 0.04
TUBA4AP68366 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TUBA4AP68366 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TUBA4AP68366 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TUBA4AP68366 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBA4AP68366 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TUBA4AP68366 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TUBA4AP68366 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TUBA4AP68366 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TUBA4AP68366 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBA4AP68366 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TUBA4AP68366 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.28■□□□□ 0.04
TUBA4AP68366 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.28■□□□□ 0.04
TUBA4AP68366 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.28■□□□□ 0.04
TUBA4AP68366 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.28■□□□□ 0.04
TUBA4AP68366 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.28■□□□□ 0.04
TUBA4AP68366 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.28■□□□□ 0.04
TUBA4AP68366 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.28■□□□□ 0.04
TUBA4AP68366 FAM197Y8-203ENST00000450145 560 ntBASIC15.28■□□□□ 0.04
TUBA4AP68366 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.28■□□□□ 0.04
TUBA4AP68366 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.28■□□□□ 0.04
TUBA4AP68366 AP002469.2-201ENST00000531724 424 ntBASIC15.28■□□□□ 0.04
TUBA4AP68366 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
TUBA4AP68366 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.28■□□□□ 0.04
TUBA4AP68366 STK25P1-201ENST00000585406 838 ntBASIC15.28■□□□□ 0.04
TUBA4AP68366 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.28■□□□□ 0.04
TUBA4AP68366 AC104692.2-201ENST00000603054 253 ntBASIC15.28■□□□□ 0.04
TUBA4AP68366 AC013467.2-201ENST00000605472 835 ntBASIC15.28■□□□□ 0.04
TUBA4AP68366 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.28■□□□□ 0.04
TUBA4AP68366 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TUBA4AP68366 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TUBA4AP68366 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.28■□□□□ 0.04
TUBA4AP68366 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBA4AP68366 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TUBA4AP68366 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBA4AP68366 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBA4AP68366 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.28■□□□□ 0.04
TUBA4AP68366 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBA4AP68366 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TUBA4AP68366 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.28■□□□□ 0.04
TUBA4AP68366 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TUBA4AP68366 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBA4AP68366 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TUBA4AP68366 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TUBA4AP68366 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TUBA4AP68366 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.27■□□□□ 0.04
TUBA4AP68366 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TUBA4AP68366 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TUBA4AP68366 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC15.27■□□□□ 0.04
TUBA4AP68366 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
TUBA4AP68366 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.27■□□□□ 0.04
TUBA4AP68366 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.27■□□□□ 0.04
TUBA4AP68366 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.27■□□□□ 0.04
TUBA4AP68366 AL021920.2-201ENST00000624828 1351 ntBASIC15.27■□□□□ 0.04
TUBA4AP68366 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TUBA4AP68366 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.27■□□□□ 0.04
TUBA4AP68366 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.27■□□□□ 0.04
TUBA4AP68366 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TUBA4AP68366 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TUBA4AP68366 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TUBA4AP68366 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TUBA4AP68366 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.27■□□□□ 0.04
TUBA4AP68366 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TUBA4AP68366 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TUBA4AP68366 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.27■□□□□ 0.04
TUBA4AP68366 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
TUBA4AP68366 SPDYE21P-201ENST00000413323 827 ntBASIC15.27■□□□□ 0.04
TUBA4AP68366 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
TUBA4AP68366 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TUBA4AP68366 AL160237.2-201ENST00000556165 472 ntBASIC15.27■□□□□ 0.04
TUBA4AP68366 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.27■□□□□ 0.04
TUBA4AP68366 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.27■□□□□ 0.04
TUBA4AP68366 AC148477.8-201ENST00000624298 468 ntBASIC15.27■□□□□ 0.04
TUBA4AP68366 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TUBA4AP68366 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TUBA4AP68366 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.27■□□□□ 0.03
TUBA4AP68366 AC079776.2-201ENST00000641154 1609 ntBASIC15.27■□□□□ 0.03
TUBA4AP68366 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.27■□□□□ 0.03
TUBA4AP68366 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
TUBA4AP68366 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TUBA4AP68366 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
TUBA4AP68366 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.27■□□□□ 0.03
TUBA4AP68366 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.27■□□□□ 0.03
TUBA4AP68366 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TUBA4AP68366 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TUBA4AP68366 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
TUBA4AP68366 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TUBA4AP68366 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms