Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC18.24■□□□□ 0.51
TPM4P67936 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TPM4P67936 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC18.24■□□□□ 0.51
TPM4P67936 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TPM4P67936 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
TPM4P67936 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TPM4P67936 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TPM4P67936 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TPM4P67936 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
TPM4P67936 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TPM4P67936 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC18.23■□□□□ 0.51
TPM4P67936 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TPM4P67936 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TPM4P67936 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
TPM4P67936 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TPM4P67936 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TPM4P67936 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.23■□□□□ 0.51
TPM4P67936 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC18.23■□□□□ 0.51
TPM4P67936 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TPM4P67936 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.23■□□□□ 0.51
TPM4P67936 AC107918.2-201ENST00000530817 355 ntBASIC18.23■□□□□ 0.51
TPM4P67936 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TPM4P67936 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TPM4P67936 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC18.23■□□□□ 0.51
TPM4P67936 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
TPM4P67936 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TPM4P67936 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TPM4P67936 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC18.23■□□□□ 0.51
TPM4P67936 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TPM4P67936 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TPM4P67936 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TPM4P67936 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.23■□□□□ 0.51
TPM4P67936 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TPM4P67936 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TPM4P67936 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TPM4P67936 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TPM4P67936 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TPM4P67936 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.22■□□□□ 0.51
TPM4P67936 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC18.22■□□□□ 0.51
TPM4P67936 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
TPM4P67936 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TPM4P67936 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TPM4P67936 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TPM4P67936 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TPM4P67936 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TPM4P67936 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.22■□□□□ 0.51
TPM4P67936 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.22■□□□□ 0.51
TPM4P67936 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.22■□□□□ 0.51
TPM4P67936 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.22■□□□□ 0.51
TPM4P67936 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.22■□□□□ 0.51
TPM4P67936 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TPM4P67936 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.22■□□□□ 0.51
TPM4P67936 MTDHP3-201ENST00000594186 672 ntBASIC18.22■□□□□ 0.51
TPM4P67936 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.22■□□□□ 0.51
TPM4P67936 GGTLC5P-201ENST00000617623 998 ntBASIC18.22■□□□□ 0.51
TPM4P67936 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TPM4P67936 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
TPM4P67936 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TPM4P67936 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TPM4P67936 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TPM4P67936 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TPM4P67936 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TPM4P67936 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TPM4P67936 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TPM4P67936 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.22■□□□□ 0.51
TPM4P67936 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TPM4P67936 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC18.22■□□□□ 0.51
TPM4P67936 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TPM4P67936 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC18.22■□□□□ 0.51
TPM4P67936 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
TPM4P67936 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TPM4P67936 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TPM4P67936 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TPM4P67936 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
TPM4P67936 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TPM4P67936 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC18.21■□□□□ 0.51
TPM4P67936 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TPM4P67936 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TPM4P67936 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TPM4P67936 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TPM4P67936 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TPM4P67936 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TPM4P67936 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TPM4P67936 AP003680.1-201ENST00000598970 3660 ntBASIC18.21■□□□□ 0.51
TPM4P67936 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TPM4P67936 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TPM4P67936 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TPM4P67936 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
TPM4P67936 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.21■□□□□ 0.51
TPM4P67936 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.21■□□□□ 0.51
TPM4P67936 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.21■□□□□ 0.51
TPM4P67936 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TPM4P67936 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.21■□□□□ 0.51
TPM4P67936 AL049597.2-201ENST00000565575 961 ntBASIC18.21■□□□□ 0.51
TPM4P67936 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.21■□□□□ 0.51
TPM4P67936 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
TPM4P67936 AC069148.1-201ENST00000608741 768 ntBASIC18.21■□□□□ 0.51
TPM4P67936 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.21■□□□□ 0.51
TPM4P67936 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.21■□□□□ 0.51
TPM4P67936 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms