Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 AC104596.2-201ENST00000512793 793 ntBASIC13.49□□□□□ -0.25
RIPPLY3P57055 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.49□□□□□ -0.25
RIPPLY3P57055 AC105233.2-201ENST00000523697 349 ntBASIC13.49□□□□□ -0.25
RIPPLY3P57055 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.49□□□□□ -0.25
RIPPLY3P57055 AF228730.5-201ENST00000530288 346 ntBASIC13.49□□□□□ -0.25
RIPPLY3P57055 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC13.49□□□□□ -0.25
RIPPLY3P57055 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC13.49□□□□□ -0.25
RIPPLY3P57055 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.49□□□□□ -0.25
RIPPLY3P57055 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC13.49□□□□□ -0.25
RIPPLY3P57055 CHMP4BP1-201ENST00000556017 588 ntBASIC13.49□□□□□ -0.25
RIPPLY3P57055 DUX4L45-201ENST00000566406 1057 ntBASIC13.49□□□□□ -0.25
RIPPLY3P57055 NAT9-222ENST00000583476 583 ntTSL 3 BASIC13.49□□□□□ -0.25
RIPPLY3P57055 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC13.49□□□□□ -0.25
RIPPLY3P57055 RN7SL828P-201ENST00000607615 303 ntBASIC13.49□□□□□ -0.25
RIPPLY3P57055 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC13.49□□□□□ -0.25
RIPPLY3P57055 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
RIPPLY3P57055 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RIPPLY3P57055 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RIPPLY3P57055 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
RIPPLY3P57055 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC13.49□□□□□ -0.25
RIPPLY3P57055 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC13.49□□□□□ -0.25
RIPPLY3P57055 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RIPPLY3P57055 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC13.49□□□□□ -0.25
RIPPLY3P57055 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.49□□□□□ -0.25
RIPPLY3P57055 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RIPPLY3P57055 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.49□□□□□ -0.25
RIPPLY3P57055 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RIPPLY3P57055 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RIPPLY3P57055 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RIPPLY3P57055 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RIPPLY3P57055 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RIPPLY3P57055 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
RIPPLY3P57055 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RIPPLY3P57055 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RIPPLY3P57055 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
RIPPLY3P57055 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
RIPPLY3P57055 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
RIPPLY3P57055 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RIPPLY3P57055 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RIPPLY3P57055 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
RIPPLY3P57055 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RIPPLY3P57055 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
RIPPLY3P57055 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC13.48□□□□□ -0.25
RIPPLY3P57055 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC13.48□□□□□ -0.25
RIPPLY3P57055 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC13.48□□□□□ -0.25
RIPPLY3P57055 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RIPPLY3P57055 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
RIPPLY3P57055 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
RIPPLY3P57055 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC13.48□□□□□ -0.25
RIPPLY3P57055 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC13.48□□□□□ -0.25
RIPPLY3P57055 RPS3-201ENST00000278572 907 ntTSL 3 BASIC13.48□□□□□ -0.25
RIPPLY3P57055 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RIPPLY3P57055 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.48□□□□□ -0.25
RIPPLY3P57055 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.48□□□□□ -0.25
RIPPLY3P57055 AC142381.1-201ENST00000426099 345 ntBASIC13.48□□□□□ -0.25
RIPPLY3P57055 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
RIPPLY3P57055 REEP1-202ENST00000453231 940 ntTSL 2 BASIC13.48□□□□□ -0.25
RIPPLY3P57055 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
RIPPLY3P57055 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC13.48□□□□□ -0.25
RIPPLY3P57055 RN7SL720P-201ENST00000488178 304 ntBASIC13.48□□□□□ -0.25
RIPPLY3P57055 IMP3P2-201ENST00000489760 475 ntBASIC13.48□□□□□ -0.25
RIPPLY3P57055 SPDYE18-201ENST00000510091 1050 ntBASIC13.48□□□□□ -0.25
RIPPLY3P57055 FAM86HP-204ENST00000513466 959 ntBASIC13.48□□□□□ -0.25
RIPPLY3P57055 PTK2-225ENST00000520892 571 ntTSL 4 BASIC13.48□□□□□ -0.25
RIPPLY3P57055 AC023310.3-201ENST00000557027 670 ntBASIC13.48□□□□□ -0.25
RIPPLY3P57055 AC100756.1-201ENST00000562736 682 ntBASIC13.48□□□□□ -0.25
RIPPLY3P57055 AC138749.3-201ENST00000567691 622 ntBASIC13.48□□□□□ -0.25
RIPPLY3P57055 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RIPPLY3P57055 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC13.48□□□□□ -0.25
RIPPLY3P57055 AC116165.1-201ENST00000611806 668 ntBASIC13.48□□□□□ -0.25
RIPPLY3P57055 AL008638.5-201ENST00000623814 1298 ntBASIC13.48□□□□□ -0.25
RIPPLY3P57055 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC13.48□□□□□ -0.25
RIPPLY3P57055 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RIPPLY3P57055 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.48□□□□□ -0.25
RIPPLY3P57055 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
RIPPLY3P57055 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RIPPLY3P57055 AL607033.1-201ENST00000623900 1599 ntBASIC13.48□□□□□ -0.25
RIPPLY3P57055 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC13.48□□□□□ -0.25
RIPPLY3P57055 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
RIPPLY3P57055 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
RIPPLY3P57055 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC13.48□□□□□ -0.25
RIPPLY3P57055 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC13.48□□□□□ -0.25
RIPPLY3P57055 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
RIPPLY3P57055 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RIPPLY3P57055 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RIPPLY3P57055 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RIPPLY3P57055 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC13.48□□□□□ -0.25
RIPPLY3P57055 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC13.48□□□□□ -0.25
RIPPLY3P57055 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
RIPPLY3P57055 SNAI3-AS1-205ENST00000568633 2096 ntBASIC13.48□□□□□ -0.25
RIPPLY3P57055 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
RIPPLY3P57055 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
RIPPLY3P57055 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RIPPLY3P57055 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RIPPLY3P57055 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RIPPLY3P57055 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RIPPLY3P57055 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
RIPPLY3P57055 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC13.47□□□□□ -0.25
RIPPLY3P57055 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RIPPLY3P57055 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms