Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 MPI-209ENST00000564003 1195 ntTSL 2 BASIC18.24■□□□□ 0.51
USP11P51784 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC18.24■□□□□ 0.51
USP11P51784 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
USP11P51784 AL355385.1-201ENST00000606123 409 ntBASIC18.24■□□□□ 0.51
USP11P51784 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC18.24■□□□□ 0.51
USP11P51784 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP11P51784 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
USP11P51784 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
USP11P51784 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
USP11P51784 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP11P51784 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP11P51784 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP11P51784 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC18.24■□□□□ 0.51
USP11P51784 AC134407.2-201ENST00000625089 1978 ntBASIC18.24■□□□□ 0.51
USP11P51784 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP11P51784 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
USP11P51784 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP11P51784 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP11P51784 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
USP11P51784 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP11P51784 AC087499.5-201ENST00000452760 1342 ntBASIC18.23■□□□□ 0.51
USP11P51784 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
USP11P51784 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC18.23■□□□□ 0.51
USP11P51784 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
USP11P51784 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP11P51784 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP11P51784 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP11P51784 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
USP11P51784 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
USP11P51784 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP11P51784 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP11P51784 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP11P51784 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC18.23■□□□□ 0.51
USP11P51784 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
USP11P51784 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP11P51784 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
USP11P51784 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.23■□□□□ 0.51
USP11P51784 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
USP11P51784 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18.23■□□□□ 0.51
USP11P51784 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC18.23■□□□□ 0.51
USP11P51784 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC18.23■□□□□ 0.51
USP11P51784 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.23■□□□□ 0.51
USP11P51784 AQP6-203ENST00000551733 849 ntTSL 3 BASIC18.23■□□□□ 0.51
USP11P51784 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
USP11P51784 RAB34-223ENST00000636154 730 ntTSL 2 BASIC18.23■□□□□ 0.51
USP11P51784 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
USP11P51784 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
USP11P51784 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP11P51784 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP11P51784 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC18.23■□□□□ 0.51
USP11P51784 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP11P51784 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP11P51784 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
USP11P51784 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
USP11P51784 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
USP11P51784 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC18.23■□□□□ 0.51
USP11P51784 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC18.23■□□□□ 0.51
USP11P51784 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC18.22■□□□□ 0.51
USP11P51784 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
USP11P51784 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.22■□□□□ 0.51
USP11P51784 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC18.22■□□□□ 0.51
USP11P51784 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
USP11P51784 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
USP11P51784 AL603832.2-201ENST00000566195 2125 ntBASIC18.22■□□□□ 0.51
USP11P51784 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
USP11P51784 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.22■□□□□ 0.51
USP11P51784 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
USP11P51784 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
USP11P51784 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
USP11P51784 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
USP11P51784 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
USP11P51784 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
USP11P51784 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC18.22■□□□□ 0.51
USP11P51784 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
USP11P51784 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
USP11P51784 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.22■□□□□ 0.51
USP11P51784 TSSK5P-201ENST00000423978 907 ntBASIC18.22■□□□□ 0.51
USP11P51784 BASP1P1-201ENST00000430708 665 ntBASIC18.22■□□□□ 0.51
USP11P51784 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC18.22■□□□□ 0.51
USP11P51784 HIST3H2BA-201ENST00000436555 524 ntBASIC18.22■□□□□ 0.51
USP11P51784 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
USP11P51784 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.22■□□□□ 0.51
USP11P51784 FXR1-221ENST00000491674 365 ntTSL 2 BASIC18.22■□□□□ 0.51
USP11P51784 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
USP11P51784 RNA5SP421-201ENST00000516864 134 ntBASIC18.22■□□□□ 0.51
USP11P51784 IGHV3-42-201ENST00000520410 361 ntBASIC18.22■□□□□ 0.51
USP11P51784 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC18.22■□□□□ 0.51
USP11P51784 CDC14C-201ENST00000428251 1719 ntBASIC18.22■□□□□ 0.51
USP11P51784 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC18.22■□□□□ 0.51
USP11P51784 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.22■□□□□ 0.51
USP11P51784 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.22■□□□□ 0.51
USP11P51784 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
USP11P51784 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC18.22■□□□□ 0.51
USP11P51784 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
USP11P51784 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC18.22■□□□□ 0.51
USP11P51784 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
USP11P51784 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC18.22■□□□□ 0.51
USP11P51784 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.22■□□□□ 0.51
USP11P51784 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
USP11P51784 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms