Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.09■□□□□ 0.33
TUBP50607 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TUBP50607 LINC01144-201ENST00000626198 1710 ntBASIC17.09■□□□□ 0.33
TUBP50607 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBP50607 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TUBP50607 PCGF3-213ENST00000620529 1899 ntBASIC17.09■□□□□ 0.33
TUBP50607 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBP50607 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.09■□□□□ 0.33
TUBP50607 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBP50607 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.09■□□□□ 0.33
TUBP50607 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBP50607 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TUBP50607 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC17.09■□□□□ 0.33
TUBP50607 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
TUBP50607 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBP50607 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBP50607 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TUBP50607 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBP50607 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TUBP50607 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBP50607 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.33
TUBP50607 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TUBP50607 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TUBP50607 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
TUBP50607 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TUBP50607 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
TUBP50607 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TUBP50607 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC17.08■□□□□ 0.33
TUBP50607 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TUBP50607 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
TUBP50607 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
TUBP50607 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
TUBP50607 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TUBP50607 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TUBP50607 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TUBP50607 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
TUBP50607 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TUBP50607 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TUBP50607 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TUBP50607 AL589702.1-201ENST00000641229 1509 ntBASIC17.08■□□□□ 0.32
TUBP50607 FO538757.1-201ENST00000623083 1397 ntBASIC17.08■□□□□ 0.32
TUBP50607 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
TUBP50607 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TUBP50607 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.08■□□□□ 0.32
TUBP50607 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.08■□□□□ 0.32
TUBP50607 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.08■□□□□ 0.32
TUBP50607 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TUBP50607 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.08■□□□□ 0.32
TUBP50607 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.08■□□□□ 0.32
TUBP50607 MIR3197-201ENST00000582241 73 ntBASIC17.08■□□□□ 0.32
TUBP50607 AC024267.1-201ENST00000582320 895 ntBASIC17.08■□□□□ 0.32
TUBP50607 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.08■□□□□ 0.32
TUBP50607 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.08■□□□□ 0.32
TUBP50607 AC003101.2-201ENST00000612557 442 ntBASIC17.08■□□□□ 0.32
TUBP50607 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.08■□□□□ 0.32
TUBP50607 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.08■□□□□ 0.32
TUBP50607 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TUBP50607 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TUBP50607 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.32
TUBP50607 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TUBP50607 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
TUBP50607 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TUBP50607 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TUBP50607 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TUBP50607 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.07■□□□□ 0.32
TUBP50607 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.07■□□□□ 0.32
TUBP50607 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TUBP50607 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TUBP50607 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TUBP50607 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TUBP50607 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.07■□□□□ 0.32
TUBP50607 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TUBP50607 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TUBP50607 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TUBP50607 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TUBP50607 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TUBP50607 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.07■□□□□ 0.32
TUBP50607 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.07■□□□□ 0.32
TUBP50607 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.07■□□□□ 0.32
TUBP50607 TREML5P-201ENST00000421694 576 ntBASIC17.07■□□□□ 0.32
TUBP50607 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TUBP50607 FAM8A3P-201ENST00000427218 844 ntBASIC17.07■□□□□ 0.32
TUBP50607 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TUBP50607 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.07■□□□□ 0.32
TUBP50607 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.07■□□□□ 0.32
TUBP50607 AC093214.1-201ENST00000511688 1107 ntBASIC17.07■□□□□ 0.32
TUBP50607 RNA5SP410-201ENST00000516285 106 ntBASIC17.07■□□□□ 0.32
TUBP50607 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.07■□□□□ 0.32
TUBP50607 AJ011932.1-201ENST00000621707 465 ntBASIC17.07■□□□□ 0.32
TUBP50607 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TUBP50607 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TUBP50607 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.07■□□□□ 0.32
TUBP50607 ALOX12P2-203ENST00000570921 1945 ntBASIC17.07■□□□□ 0.32
TUBP50607 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TUBP50607 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TUBP50607 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TUBP50607 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
TUBP50607 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TUBP50607 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.06■□□□□ 0.32
TUBP50607 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms