Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 SPDYE18-201ENST00000510091 1050 ntBASIC15.29■□□□□ 0.04
GABRA4P48169 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.29■□□□□ 0.04
GABRA4P48169 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.29■□□□□ 0.04
GABRA4P48169 AC135586.1-201ENST00000539323 574 ntBASIC15.29■□□□□ 0.04
GABRA4P48169 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
GABRA4P48169 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
GABRA4P48169 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GABRA4P48169 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.29■□□□□ 0.04
GABRA4P48169 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.29■□□□□ 0.04
GABRA4P48169 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.29■□□□□ 0.04
GABRA4P48169 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.29■□□□□ 0.04
GABRA4P48169 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
GABRA4P48169 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
GABRA4P48169 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GABRA4P48169 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GABRA4P48169 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
GABRA4P48169 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GABRA4P48169 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
GABRA4P48169 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.29■□□□□ 0.04
GABRA4P48169 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GABRA4P48169 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.29■□□□□ 0.04
GABRA4P48169 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.29■□□□□ 0.04
GABRA4P48169 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GABRA4P48169 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GABRA4P48169 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GABRA4P48169 MTHFR-217ENST00000641820 1569 ntBASIC15.28■□□□□ 0.04
GABRA4P48169 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GABRA4P48169 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GABRA4P48169 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GABRA4P48169 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.28■□□□□ 0.04
GABRA4P48169 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
GABRA4P48169 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GABRA4P48169 AP001282.1-201ENST00000531301 1499 ntBASIC15.28■□□□□ 0.04
GABRA4P48169 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GABRA4P48169 KRT8P37-201ENST00000451609 1420 ntBASIC15.28■□□□□ 0.04
GABRA4P48169 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.28■□□□□ 0.04
GABRA4P48169 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.28■□□□□ 0.04
GABRA4P48169 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
GABRA4P48169 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.28■□□□□ 0.04
GABRA4P48169 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
GABRA4P48169 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
GABRA4P48169 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
GABRA4P48169 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
GABRA4P48169 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
GABRA4P48169 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GABRA4P48169 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GABRA4P48169 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GABRA4P48169 AZGP1P1-201ENST00000411909 902 ntBASIC15.28■□□□□ 0.04
GABRA4P48169 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.28■□□□□ 0.04
GABRA4P48169 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.28■□□□□ 0.04
GABRA4P48169 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.28■□□□□ 0.04
GABRA4P48169 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GABRA4P48169 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.28■□□□□ 0.04
GABRA4P48169 SDHAP3-202ENST00000515467 728 ntBASIC15.28■□□□□ 0.04
GABRA4P48169 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
GABRA4P48169 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.28■□□□□ 0.04
GABRA4P48169 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC15.28■□□□□ 0.04
GABRA4P48169 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.28■□□□□ 0.04
GABRA4P48169 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.28■□□□□ 0.04
GABRA4P48169 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.28■□□□□ 0.04
GABRA4P48169 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GABRA4P48169 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GABRA4P48169 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GABRA4P48169 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GABRA4P48169 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GABRA4P48169 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
GABRA4P48169 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GABRA4P48169 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
GABRA4P48169 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GABRA4P48169 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GABRA4P48169 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GABRA4P48169 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
GABRA4P48169 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GABRA4P48169 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GABRA4P48169 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.27■□□□□ 0.04
GABRA4P48169 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GABRA4P48169 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
GABRA4P48169 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.27■□□□□ 0.04
GABRA4P48169 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.27■□□□□ 0.04
GABRA4P48169 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GABRA4P48169 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
GABRA4P48169 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.27■□□□□ 0.04
GABRA4P48169 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GABRA4P48169 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GABRA4P48169 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.27■□□□□ 0.04
GABRA4P48169 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.27■□□□□ 0.04
GABRA4P48169 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.27■□□□□ 0.04
GABRA4P48169 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GABRA4P48169 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GABRA4P48169 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.27■□□□□ 0.04
GABRA4P48169 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GABRA4P48169 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GABRA4P48169 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.27■□□□□ 0.04
GABRA4P48169 AC004461.2-201ENST00000629517 803 ntBASIC15.27■□□□□ 0.04
GABRA4P48169 AL109936.8-201ENST00000641772 604 ntBASIC15.27■□□□□ 0.04
GABRA4P48169 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
GABRA4P48169 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.27■□□□□ 0.03
GABRA4P48169 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.27■□□□□ 0.03
GABRA4P48169 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.27■□□□□ 0.03
GABRA4P48169 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms