Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MSR1P21757 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MSR1P21757 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MSR1P21757 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.36□□□□□ -0.11
MSR1P21757 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
MSR1P21757 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
MSR1P21757 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
MSR1P21757 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
MSR1P21757 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.35□□□□□ -0.11
MSR1P21757 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
MSR1P21757 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
MSR1P21757 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MSR1P21757 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
MSR1P21757 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MSR1P21757 YBX2P1-201ENST00000394192 760 ntBASIC14.35□□□□□ -0.11
MSR1P21757 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.35□□□□□ -0.11
MSR1P21757 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.35□□□□□ -0.11
MSR1P21757 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
MSR1P21757 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.35□□□□□ -0.11
MSR1P21757 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.35□□□□□ -0.11
MSR1P21757 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.35□□□□□ -0.11
MSR1P21757 AC245100.5-201ENST00000452108 331 ntBASIC14.35□□□□□ -0.11
MSR1P21757 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
MSR1P21757 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
MSR1P21757 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.35□□□□□ -0.11
MSR1P21757 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.35□□□□□ -0.11
MSR1P21757 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.35□□□□□ -0.11
MSR1P21757 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
MSR1P21757 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.35□□□□□ -0.11
MSR1P21757 AC092902.6-201ENST00000641783 218 ntBASIC14.35□□□□□ -0.11
MSR1P21757 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.35□□□□□ -0.11
MSR1P21757 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MSR1P21757 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.35□□□□□ -0.11
MSR1P21757 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MSR1P21757 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.35□□□□□ -0.11
MSR1P21757 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.35□□□□□ -0.11
MSR1P21757 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
MSR1P21757 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.35□□□□□ -0.11
MSR1P21757 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.35□□□□□ -0.11
MSR1P21757 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
MSR1P21757 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.35□□□□□ -0.11
MSR1P21757 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
MSR1P21757 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
MSR1P21757 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MSR1P21757 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
MSR1P21757 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MSR1P21757 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
MSR1P21757 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.35□□□□□ -0.11
MSR1P21757 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
MSR1P21757 AC008741.2-201ENST00000612792 3115 ntBASIC14.35□□□□□ -0.11
MSR1P21757 AC008894.3-201ENST00000624324 3103 ntBASIC14.35□□□□□ -0.11
MSR1P21757 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
MSR1P21757 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.34□□□□□ -0.11
MSR1P21757 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MSR1P21757 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
MSR1P21757 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MSR1P21757 MIR600HG-201ENST00000449175 5984 ntBASIC14.34□□□□□ -0.11
MSR1P21757 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MSR1P21757 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MSR1P21757 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MSR1P21757 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
MSR1P21757 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.34□□□□□ -0.11
MSR1P21757 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MSR1P21757 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MSR1P21757 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
MSR1P21757 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
MSR1P21757 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
MSR1P21757 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MSR1P21757 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MSR1P21757 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MSR1P21757 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MSR1P21757 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.34□□□□□ -0.11
MSR1P21757 TFAMP1-201ENST00000412727 736 ntBASIC14.34□□□□□ -0.11
MSR1P21757 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.34□□□□□ -0.11
MSR1P21757 ACTG1P14-201ENST00000446382 1122 ntBASIC14.34□□□□□ -0.11
MSR1P21757 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
MSR1P21757 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.34□□□□□ -0.11
MSR1P21757 AC105233.2-201ENST00000523697 349 ntBASIC14.34□□□□□ -0.11
MSR1P21757 AF228730.5-201ENST00000530288 346 ntBASIC14.34□□□□□ -0.11
MSR1P21757 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.34□□□□□ -0.11
MSR1P21757 AC073389.1-201ENST00000595595 795 ntBASIC14.34□□□□□ -0.11
MSR1P21757 MTDHP5-201ENST00000598980 586 ntBASIC14.34□□□□□ -0.11
MSR1P21757 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.34□□□□□ -0.11
MSR1P21757 C20orf181-201ENST00000623918 480 ntBASIC14.34□□□□□ -0.11
MSR1P21757 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MSR1P21757 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MSR1P21757 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
MSR1P21757 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
MSR1P21757 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
MSR1P21757 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
MSR1P21757 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MSR1P21757 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
MSR1P21757 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MSR1P21757 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
MSR1P21757 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MSR1P21757 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
MSR1P21757 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MSR1P21757 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
MSR1P21757 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MSR1P21757 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms