Protein–RNA interactions for Protein: P0DMR1

HNRNPCL4, Heterogeneous nuclear ribonucleoprotein C-like 4, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPCL4P0DMR1 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HNRNPCL4P0DMR1 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
HNRNPCL4P0DMR1 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HNRNPCL4P0DMR1 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HNRNPCL4P0DMR1 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HNRNPCL4P0DMR1 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
HNRNPCL4P0DMR1 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HNRNPCL4P0DMR1 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HNRNPCL4P0DMR1 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.1■□□□□ 0.01
HNRNPCL4P0DMR1 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
HNRNPCL4P0DMR1 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HNRNPCL4P0DMR1 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HNRNPCL4P0DMR1 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
HNRNPCL4P0DMR1 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
HNRNPCL4P0DMR1 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HNRNPCL4P0DMR1 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HNRNPCL4P0DMR1 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
HNRNPCL4P0DMR1 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HNRNPCL4P0DMR1 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.1■□□□□ 0.01
HNRNPCL4P0DMR1 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.1■□□□□ 0.01
HNRNPCL4P0DMR1 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HNRNPCL4P0DMR1 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HNRNPCL4P0DMR1 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.1■□□□□ 0.01
HNRNPCL4P0DMR1 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.1■□□□□ 0.01
HNRNPCL4P0DMR1 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
HNRNPCL4P0DMR1 AC009078.2-202ENST00000463353 338 ntBASIC15.1■□□□□ 0.01
HNRNPCL4P0DMR1 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.1■□□□□ 0.01
HNRNPCL4P0DMR1 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.1■□□□□ 0.01
HNRNPCL4P0DMR1 KRT19P2-202ENST00000557173 1012 ntBASIC15.1■□□□□ 0.01
HNRNPCL4P0DMR1 AC034105.1-201ENST00000563488 319 ntBASIC15.1■□□□□ 0.01
HNRNPCL4P0DMR1 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.1■□□□□ 0.01
HNRNPCL4P0DMR1 AC064836.3-201ENST00000607928 673 ntBASIC15.1■□□□□ 0.01
HNRNPCL4P0DMR1 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HNRNPCL4P0DMR1 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.1■□□□□ 0.01
HNRNPCL4P0DMR1 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.1■□□□□ 0.01
HNRNPCL4P0DMR1 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HNRNPCL4P0DMR1 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
HNRNPCL4P0DMR1 AC073439.1-201ENST00000624121 1774 ntBASIC15.1■□□□□ 0.01
HNRNPCL4P0DMR1 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HNRNPCL4P0DMR1 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HNRNPCL4P0DMR1 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.1■□□□□ 0.01
HNRNPCL4P0DMR1 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
HNRNPCL4P0DMR1 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HNRNPCL4P0DMR1 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
HNRNPCL4P0DMR1 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HNRNPCL4P0DMR1 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.1■□□□□ 0.01
HNRNPCL4P0DMR1 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.1■□□□□ 0.01
HNRNPCL4P0DMR1 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.1■□□□□ 0.01
HNRNPCL4P0DMR1 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HNRNPCL4P0DMR1 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.09■□□□□ 0.01
HNRNPCL4P0DMR1 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
HNRNPCL4P0DMR1 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HNRNPCL4P0DMR1 WASH6P-202ENST00000359512 1437 ntBASIC15.09■□□□□ 0.01
HNRNPCL4P0DMR1 AC104109.2-201ENST00000602919 1418 ntBASIC15.09■□□□□ 0.01
HNRNPCL4P0DMR1 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.09■□□□□ 0.01
HNRNPCL4P0DMR1 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.09■□□□□ 0.01
HNRNPCL4P0DMR1 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.09■□□□□ 0.01
HNRNPCL4P0DMR1 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HNRNPCL4P0DMR1 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HNRNPCL4P0DMR1 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.09■□□□□ 0.01
HNRNPCL4P0DMR1 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.09■□□□□ 0.01
HNRNPCL4P0DMR1 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HNRNPCL4P0DMR1 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.09■□□□□ 0.01
HNRNPCL4P0DMR1 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.09■□□□□ 0.01
HNRNPCL4P0DMR1 AL589702.1-201ENST00000641229 1509 ntBASIC15.09■□□□□ 0.01
HNRNPCL4P0DMR1 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.09■□□□□ 0.01
HNRNPCL4P0DMR1 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
HNRNPCL4P0DMR1 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HNRNPCL4P0DMR1 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
HNRNPCL4P0DMR1 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
HNRNPCL4P0DMR1 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.09■□□□□ 0.01
HNRNPCL4P0DMR1 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.09■□□□□ 0.01
HNRNPCL4P0DMR1 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.09■□□□□ 0.01
HNRNPCL4P0DMR1 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
HNRNPCL4P0DMR1 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HNRNPCL4P0DMR1 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.09■□□□□ 0.01
HNRNPCL4P0DMR1 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.09■□□□□ 0.01
HNRNPCL4P0DMR1 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.09■□□□□ 0.01
HNRNPCL4P0DMR1 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.09■□□□□ 0.01
HNRNPCL4P0DMR1 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.09■□□□□ 0.01
HNRNPCL4P0DMR1 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HNRNPCL4P0DMR1 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.09■□□□□ 0.01
HNRNPCL4P0DMR1 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
HNRNPCL4P0DMR1 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.09■□□□□ 0.01
HNRNPCL4P0DMR1 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HNRNPCL4P0DMR1 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
HNRNPCL4P0DMR1 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
HNRNPCL4P0DMR1 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HNRNPCL4P0DMR1 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
HNRNPCL4P0DMR1 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
HNRNPCL4P0DMR1 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
HNRNPCL4P0DMR1 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.08■□□□□ 0.01
HNRNPCL4P0DMR1 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
HNRNPCL4P0DMR1 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.08■□□□□ 0.01
HNRNPCL4P0DMR1 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0.01
HNRNPCL4P0DMR1 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.08■□□□□ 0.01
HNRNPCL4P0DMR1 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
HNRNPCL4P0DMR1 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.08■□□□□ 0.01
HNRNPCL4P0DMR1 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HNRNPCL4P0DMR1 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms