Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RIPK2O43353 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RIPK2O43353 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
RIPK2O43353 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.5■□□□□ 0.23
RIPK2O43353 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.5■□□□□ 0.23
RIPK2O43353 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.5■□□□□ 0.23
RIPK2O43353 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.5■□□□□ 0.23
RIPK2O43353 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RIPK2O43353 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RIPK2O43353 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.5■□□□□ 0.23
RIPK2O43353 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.5■□□□□ 0.23
RIPK2O43353 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RIPK2O43353 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RIPK2O43353 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RIPK2O43353 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RIPK2O43353 AC023908.3-201ENST00000564211 3047 ntBASIC16.49■□□□□ 0.23
RIPK2O43353 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
RIPK2O43353 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RIPK2O43353 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RIPK2O43353 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RIPK2O43353 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.49■□□□□ 0.23
RIPK2O43353 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RIPK2O43353 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RIPK2O43353 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
RIPK2O43353 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RIPK2O43353 LAGE3P1-201ENST00000425356 484 ntBASIC16.49■□□□□ 0.23
RIPK2O43353 DUSP5P1-201ENST00000441325 1139 ntBASIC16.49■□□□□ 0.23
RIPK2O43353 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RIPK2O43353 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.49■□□□□ 0.23
RIPK2O43353 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.49■□□□□ 0.23
RIPK2O43353 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.49■□□□□ 0.23
RIPK2O43353 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
RIPK2O43353 AL049597.2-201ENST00000565575 961 ntBASIC16.49■□□□□ 0.23
RIPK2O43353 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.49■□□□□ 0.23
RIPK2O43353 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RIPK2O43353 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
RIPK2O43353 NORAD-201ENST00000565493 5339 ntBASIC16.49■□□□□ 0.23
RIPK2O43353 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RIPK2O43353 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
RIPK2O43353 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RIPK2O43353 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RIPK2O43353 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.49■□□□□ 0.23
RIPK2O43353 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
RIPK2O43353 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.49■□□□□ 0.23
RIPK2O43353 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RIPK2O43353 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RIPK2O43353 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
RIPK2O43353 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.48■□□□□ 0.23
RIPK2O43353 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RIPK2O43353 AC092127.1-201ENST00000567093 3455 ntBASIC16.48■□□□□ 0.23
RIPK2O43353 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RIPK2O43353 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RIPK2O43353 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.48■□□□□ 0.23
RIPK2O43353 RNU1-129P-201ENST00000384064 167 ntBASIC16.48■□□□□ 0.23
RIPK2O43353 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RIPK2O43353 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.48■□□□□ 0.23
RIPK2O43353 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
RIPK2O43353 U1.21-201ENST00000580816 167 ntBASIC16.48■□□□□ 0.23
RIPK2O43353 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RIPK2O43353 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.48■□□□□ 0.23
RIPK2O43353 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RIPK2O43353 AC091076.1-201ENST00000610741 619 ntBASIC16.48■□□□□ 0.23
RIPK2O43353 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
RIPK2O43353 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RIPK2O43353 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
RIPK2O43353 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.48■□□□□ 0.23
RIPK2O43353 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RIPK2O43353 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.48■□□□□ 0.23
RIPK2O43353 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RIPK2O43353 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RIPK2O43353 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RIPK2O43353 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
RIPK2O43353 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RIPK2O43353 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.47■□□□□ 0.23
RIPK2O43353 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
RIPK2O43353 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RIPK2O43353 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
RIPK2O43353 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RIPK2O43353 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
RIPK2O43353 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
RIPK2O43353 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.47■□□□□ 0.23
RIPK2O43353 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RIPK2O43353 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RIPK2O43353 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RIPK2O43353 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
RIPK2O43353 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.47■□□□□ 0.23
RIPK2O43353 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RIPK2O43353 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.47■□□□□ 0.23
RIPK2O43353 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
RIPK2O43353 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RIPK2O43353 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.47■□□□□ 0.23
RIPK2O43353 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RIPK2O43353 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.47■□□□□ 0.23
RIPK2O43353 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
RIPK2O43353 AC093724.1-201ENST00000448659 1027 ntBASIC16.47■□□□□ 0.23
RIPK2O43353 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.47■□□□□ 0.23
RIPK2O43353 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RIPK2O43353 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.47■□□□□ 0.23
RIPK2O43353 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.47■□□□□ 0.23
RIPK2O43353 AC008608.2-201ENST00000606089 416 ntBASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms