Protein–RNA interactions for Protein: A6NHT5

HMX3, Homeobox protein HMX3, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMX3A6NHT5 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMX3A6NHT5 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMX3A6NHT5 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMX3A6NHT5 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMX3A6NHT5 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC14.13□□□□□ -0.15
HMX3A6NHT5 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC14.13□□□□□ -0.15
HMX3A6NHT5 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HMX3A6NHT5 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC14.13□□□□□ -0.15
HMX3A6NHT5 AC063952.2-201ENST00000498792 1227 ntBASIC14.13□□□□□ -0.15
HMX3A6NHT5 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC14.13□□□□□ -0.15
HMX3A6NHT5 AC112698.1-201ENST00000510299 916 ntBASIC14.13□□□□□ -0.15
HMX3A6NHT5 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC14.13□□□□□ -0.15
HMX3A6NHT5 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC14.13□□□□□ -0.15
HMX3A6NHT5 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC14.13□□□□□ -0.15
HMX3A6NHT5 AC005332.3-201ENST00000589904 676 ntBASIC14.13□□□□□ -0.15
HMX3A6NHT5 GPR32P1-201ENST00000601788 811 ntBASIC14.13□□□□□ -0.15
HMX3A6NHT5 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.13□□□□□ -0.15
HMX3A6NHT5 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.13□□□□□ -0.15
HMX3A6NHT5 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMX3A6NHT5 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMX3A6NHT5 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
HMX3A6NHT5 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HMX3A6NHT5 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMX3A6NHT5 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.13□□□□□ -0.15
HMX3A6NHT5 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMX3A6NHT5 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.13□□□□□ -0.15
HMX3A6NHT5 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
HMX3A6NHT5 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HMX3A6NHT5 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMX3A6NHT5 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMX3A6NHT5 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HMX3A6NHT5 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMX3A6NHT5 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMX3A6NHT5 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC14.13□□□□□ -0.15
HMX3A6NHT5 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
HMX3A6NHT5 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMX3A6NHT5 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HMX3A6NHT5 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HMX3A6NHT5 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HMX3A6NHT5 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMX3A6NHT5 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.13□□□□□ -0.15
HMX3A6NHT5 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMX3A6NHT5 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMX3A6NHT5 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HMX3A6NHT5 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMX3A6NHT5 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMX3A6NHT5 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMX3A6NHT5 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
HMX3A6NHT5 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMX3A6NHT5 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HMX3A6NHT5 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMX3A6NHT5 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMX3A6NHT5 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMX3A6NHT5 AC092919.2-201ENST00000623631 1645 ntBASIC14.12□□□□□ -0.15
HMX3A6NHT5 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMX3A6NHT5 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC14.12□□□□□ -0.15
HMX3A6NHT5 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMX3A6NHT5 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMX3A6NHT5 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HMX3A6NHT5 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.12□□□□□ -0.15
HMX3A6NHT5 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HMX3A6NHT5 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMX3A6NHT5 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMX3A6NHT5 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC14.12□□□□□ -0.15
HMX3A6NHT5 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.12□□□□□ -0.15
HMX3A6NHT5 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMX3A6NHT5 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
HMX3A6NHT5 TMPOP1-202ENST00000424642 1267 ntBASIC14.12□□□□□ -0.15
HMX3A6NHT5 DUX4L26-201ENST00000489078 1255 ntBASIC14.12□□□□□ -0.15
HMX3A6NHT5 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HMX3A6NHT5 AC022616.7-201ENST00000525383 220 ntBASIC14.12□□□□□ -0.15
HMX3A6NHT5 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC14.12□□□□□ -0.15
HMX3A6NHT5 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC14.12□□□□□ -0.15
HMX3A6NHT5 RNF126P1-202ENST00000569893 925 ntBASIC14.12□□□□□ -0.15
HMX3A6NHT5 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC14.12□□□□□ -0.15
HMX3A6NHT5 NAA38-203ENST00000575071 553 ntTSL 2 BASIC14.12□□□□□ -0.15
HMX3A6NHT5 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMX3A6NHT5 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
HMX3A6NHT5 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMX3A6NHT5 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
HMX3A6NHT5 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HMX3A6NHT5 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.12□□□□□ -0.15
HMX3A6NHT5 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.12□□□□□ -0.15
HMX3A6NHT5 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
HMX3A6NHT5 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.12□□□□□ -0.15
HMX3A6NHT5 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.12□□□□□ -0.15
HMX3A6NHT5 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMX3A6NHT5 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HMX3A6NHT5 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HMX3A6NHT5 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
HMX3A6NHT5 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
HMX3A6NHT5 Z83836.1-201ENST00000624605 1642 ntBASIC14.12□□□□□ -0.15
HMX3A6NHT5 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMX3A6NHT5 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HMX3A6NHT5 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HMX3A6NHT5 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.11□□□□□ -0.15
HMX3A6NHT5 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMX3A6NHT5 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC14.11□□□□□ -0.15
HMX3A6NHT5 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMX3A6NHT5 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms