Protein–RNA interactions for Protein: Q9Y5I1

PCDHA11, Protocadherin alpha-11, humanhuman

Predictions only

Length 949 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11Q9Y5I1 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
PCDHA11Q9Y5I1 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PCDHA11Q9Y5I1 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
PCDHA11Q9Y5I1 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC25.84■■□□□ 1.73
PCDHA11Q9Y5I1 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PCDHA11Q9Y5I1 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC25.84■■□□□ 1.73
PCDHA11Q9Y5I1 AC106739.1-201ENST00000617035 715 ntBASIC25.84■■□□□ 1.73
PCDHA11Q9Y5I1 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
PCDHA11Q9Y5I1 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
PCDHA11Q9Y5I1 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC25.83■■□□□ 1.73
PCDHA11Q9Y5I1 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC25.83■■□□□ 1.73
PCDHA11Q9Y5I1 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
PCDHA11Q9Y5I1 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
PCDHA11Q9Y5I1 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC25.83■■□□□ 1.73
PCDHA11Q9Y5I1 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC25.83■■□□□ 1.72
PCDHA11Q9Y5I1 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
PCDHA11Q9Y5I1 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
PCDHA11Q9Y5I1 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
PCDHA11Q9Y5I1 TK2-202ENST00000417693 1046 ntTSL 2 BASIC25.82■■□□□ 1.72
PCDHA11Q9Y5I1 AC026271.2-201ENST00000428091 497 ntBASIC25.82■■□□□ 1.72
PCDHA11Q9Y5I1 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC25.82■■□□□ 1.72
PCDHA11Q9Y5I1 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PCDHA11Q9Y5I1 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PCDHA11Q9Y5I1 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC25.82■■□□□ 1.72
PCDHA11Q9Y5I1 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC25.81■■□□□ 1.72
PCDHA11Q9Y5I1 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC25.81■■□□□ 1.72
PCDHA11Q9Y5I1 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
PCDHA11Q9Y5I1 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC25.81■■□□□ 1.72
PCDHA11Q9Y5I1 AC142381.2-201ENST00000566120 298 ntBASIC25.81■■□□□ 1.72
PCDHA11Q9Y5I1 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC25.81■■□□□ 1.72
PCDHA11Q9Y5I1 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC25.81■■□□□ 1.72
PCDHA11Q9Y5I1 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC25.81■■□□□ 1.72
PCDHA11Q9Y5I1 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC25.8■■□□□ 1.72
PCDHA11Q9Y5I1 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
PCDHA11Q9Y5I1 PBX2P1-201ENST00000493219 1291 ntBASIC25.8■■□□□ 1.72
PCDHA11Q9Y5I1 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC25.8■■□□□ 1.72
PCDHA11Q9Y5I1 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PCDHA11Q9Y5I1 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PCDHA11Q9Y5I1 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
PCDHA11Q9Y5I1 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
PCDHA11Q9Y5I1 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
PCDHA11Q9Y5I1 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC25.79■■□□□ 1.72
PCDHA11Q9Y5I1 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
PCDHA11Q9Y5I1 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
PCDHA11Q9Y5I1 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC25.79■■□□□ 1.72
PCDHA11Q9Y5I1 AC104564.3-201ENST00000582367 638 ntBASIC25.79■■□□□ 1.72
PCDHA11Q9Y5I1 AC011551.1-201ENST00000614101 683 ntBASIC25.79■■□□□ 1.72
PCDHA11Q9Y5I1 LINC01003-201ENST00000564834 1764 ntBASIC25.79■■□□□ 1.72
PCDHA11Q9Y5I1 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
PCDHA11Q9Y5I1 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
PCDHA11Q9Y5I1 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
PCDHA11Q9Y5I1 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC25.78■■□□□ 1.72
PCDHA11Q9Y5I1 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
PCDHA11Q9Y5I1 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
PCDHA11Q9Y5I1 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC25.78■■□□□ 1.72
PCDHA11Q9Y5I1 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
PCDHA11Q9Y5I1 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC25.78■■□□□ 1.72
PCDHA11Q9Y5I1 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC25.77■■□□□ 1.72
PCDHA11Q9Y5I1 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC25.77■■□□□ 1.72
PCDHA11Q9Y5I1 GAK-223ENST00000628912 497 ntTSL 5 BASIC25.77■■□□□ 1.72
PCDHA11Q9Y5I1 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC25.77■■□□□ 1.72
PCDHA11Q9Y5I1 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PCDHA11Q9Y5I1 SHF-208ENST00000560734 1731 ntTSL 3 BASIC25.77■■□□□ 1.72
PCDHA11Q9Y5I1 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC25.77■■□□□ 1.72
PCDHA11Q9Y5I1 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
PCDHA11Q9Y5I1 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC25.76■■□□□ 1.71
PCDHA11Q9Y5I1 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
PCDHA11Q9Y5I1 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC25.76■■□□□ 1.71
PCDHA11Q9Y5I1 RASSF1-AS1-201ENST00000629828 790 ntBASIC25.76■■□□□ 1.71
PCDHA11Q9Y5I1 AC135279.3-201ENST00000610945 1311 ntBASIC25.76■■□□□ 1.71
PCDHA11Q9Y5I1 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
PCDHA11Q9Y5I1 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
PCDHA11Q9Y5I1 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
PCDHA11Q9Y5I1 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC25.75■■□□□ 1.71
PCDHA11Q9Y5I1 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
PCDHA11Q9Y5I1 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
PCDHA11Q9Y5I1 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC25.75■■□□□ 1.71
PCDHA11Q9Y5I1 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC25.75■■□□□ 1.71
PCDHA11Q9Y5I1 MIR5787-201ENST00000611784 55 ntBASIC25.75■■□□□ 1.71
PCDHA11Q9Y5I1 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC25.75■■□□□ 1.71
PCDHA11Q9Y5I1 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
PCDHA11Q9Y5I1 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PCDHA11Q9Y5I1 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PCDHA11Q9Y5I1 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PCDHA11Q9Y5I1 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC25.74■■□□□ 1.71
PCDHA11Q9Y5I1 CLTA-210ENST00000540080 989 ntTSL 2 BASIC25.74■■□□□ 1.71
PCDHA11Q9Y5I1 AL449106.1-201ENST00000608517 1980 ntBASIC25.73■■□□□ 1.71
PCDHA11Q9Y5I1 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
PCDHA11Q9Y5I1 CD72-202ENST00000378430 585 ntTSL 3 BASIC25.73■■□□□ 1.71
PCDHA11Q9Y5I1 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC25.73■■□□□ 1.71
PCDHA11Q9Y5I1 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC25.73■■□□□ 1.71
PCDHA11Q9Y5I1 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
PCDHA11Q9Y5I1 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
PCDHA11Q9Y5I1 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
PCDHA11Q9Y5I1 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
PCDHA11Q9Y5I1 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC25.72■■□□□ 1.71
PCDHA11Q9Y5I1 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
PCDHA11Q9Y5I1 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC25.72■■□□□ 1.71
PCDHA11Q9Y5I1 LGR4-203ENST00000480977 492 ntTSL 2 BASIC25.72■■□□□ 1.71
PCDHA11Q9Y5I1 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms