Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHGA4Q9Y5G9 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC23.1■■□□□ 1.29
PCDHGA4Q9Y5G9 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC23.1■■□□□ 1.29
PCDHGA4Q9Y5G9 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHGA4Q9Y5G9 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHGA4Q9Y5G9 AL031848.2-201ENST00000607670 837 ntBASIC23.1■■□□□ 1.29
PCDHGA4Q9Y5G9 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHGA4Q9Y5G9 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHGA4Q9Y5G9 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHGA4Q9Y5G9 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
PCDHGA4Q9Y5G9 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHGA4Q9Y5G9 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHGA4Q9Y5G9 IDNK-201ENST00000376417 511 ntTSL 5 BASIC23.09■■□□□ 1.29
PCDHGA4Q9Y5G9 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHGA4Q9Y5G9 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC23.09■■□□□ 1.29
PCDHGA4Q9Y5G9 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC23.09■■□□□ 1.29
PCDHGA4Q9Y5G9 PRTG-204ENST00000561292 833 ntTSL 3 BASIC23.09■■□□□ 1.29
PCDHGA4Q9Y5G9 AC103724.3-201ENST00000564481 992 ntBASIC23.09■■□□□ 1.29
PCDHGA4Q9Y5G9 ERN1-208ENST00000606895 2068 ntBASIC23.09■■□□□ 1.29
PCDHGA4Q9Y5G9 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC23.08■■□□□ 1.29
PCDHGA4Q9Y5G9 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHGA4Q9Y5G9 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHGA4Q9Y5G9 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHGA4Q9Y5G9 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHGA4Q9Y5G9 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
PCDHGA4Q9Y5G9 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
PCDHGA4Q9Y5G9 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
PCDHGA4Q9Y5G9 AL356441.2-201ENST00000443009 864 ntBASIC23.07■■□□□ 1.28
PCDHGA4Q9Y5G9 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHGA4Q9Y5G9 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC23.07■■□□□ 1.28
PCDHGA4Q9Y5G9 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHGA4Q9Y5G9 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHGA4Q9Y5G9 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC23.06■■□□□ 1.28
PCDHGA4Q9Y5G9 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.06■■□□□ 1.28
PCDHGA4Q9Y5G9 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHGA4Q9Y5G9 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHGA4Q9Y5G9 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHGA4Q9Y5G9 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.05■■□□□ 1.28
PCDHGA4Q9Y5G9 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
PCDHGA4Q9Y5G9 AC145676.1-201ENST00000514988 2004 ntBASIC23.05■■□□□ 1.28
PCDHGA4Q9Y5G9 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC23.05■■□□□ 1.28
PCDHGA4Q9Y5G9 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.05■■□□□ 1.28
PCDHGA4Q9Y5G9 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHGA4Q9Y5G9 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.05■■□□□ 1.28
PCDHGA4Q9Y5G9 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.05■■□□□ 1.28
PCDHGA4Q9Y5G9 AC010501.1-201ENST00000606270 1962 ntBASIC23.05■■□□□ 1.28
PCDHGA4Q9Y5G9 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHGA4Q9Y5G9 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHGA4Q9Y5G9 DUSP8P4-201ENST00000399538 1761 ntBASIC23.04■■□□□ 1.28
PCDHGA4Q9Y5G9 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHGA4Q9Y5G9 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.04■■□□□ 1.28
PCDHGA4Q9Y5G9 MTX2-204ENST00000443241 799 ntTSL 3 BASIC23.04■■□□□ 1.28
PCDHGA4Q9Y5G9 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHGA4Q9Y5G9 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHGA4Q9Y5G9 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
PCDHGA4Q9Y5G9 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
PCDHGA4Q9Y5G9 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHGA4Q9Y5G9 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHGA4Q9Y5G9 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
PCDHGA4Q9Y5G9 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHGA4Q9Y5G9 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHGA4Q9Y5G9 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
PCDHGA4Q9Y5G9 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHGA4Q9Y5G9 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC23.02■■□□□ 1.28
PCDHGA4Q9Y5G9 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHGA4Q9Y5G9 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHGA4Q9Y5G9 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.02■■□□□ 1.28
PCDHGA4Q9Y5G9 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
PCDHGA4Q9Y5G9 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
PCDHGA4Q9Y5G9 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHGA4Q9Y5G9 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.01■■□□□ 1.27
PCDHGA4Q9Y5G9 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHGA4Q9Y5G9 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC23.01■■□□□ 1.27
PCDHGA4Q9Y5G9 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC23.01■■□□□ 1.27
PCDHGA4Q9Y5G9 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHGA4Q9Y5G9 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC23.01■■□□□ 1.27
PCDHGA4Q9Y5G9 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
PCDHGA4Q9Y5G9 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC23.01■■□□□ 1.27
PCDHGA4Q9Y5G9 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.01■■□□□ 1.27
PCDHGA4Q9Y5G9 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
PCDHGA4Q9Y5G9 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23■■□□□ 1.27
PCDHGA4Q9Y5G9 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
PCDHGA4Q9Y5G9 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PCDHGA4Q9Y5G9 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC23■■□□□ 1.27
PCDHGA4Q9Y5G9 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
PCDHGA4Q9Y5G9 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC23■■□□□ 1.27
PCDHGA4Q9Y5G9 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PCDHGA4Q9Y5G9 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC22.99■■□□□ 1.27
PCDHGA4Q9Y5G9 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHGA4Q9Y5G9 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHGA4Q9Y5G9 AC096887.2-201ENST00000623443 1957 ntBASIC22.99■■□□□ 1.27
PCDHGA4Q9Y5G9 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC22.99■■□□□ 1.27
PCDHGA4Q9Y5G9 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHGA4Q9Y5G9 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC22.98■■□□□ 1.27
PCDHGA4Q9Y5G9 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDHGA4Q9Y5G9 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
PCDHGA4Q9Y5G9 RNF146-205ENST00000477776 762 ntTSL 3 BASIC22.98■■□□□ 1.27
PCDHGA4Q9Y5G9 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
PCDHGA4Q9Y5G9 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC22.98■■□□□ 1.27
PCDHGA4Q9Y5G9 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC22.98■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms