Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC36.99■■■■□ 3.51
CDK11AQ9UQ88 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC36.99■■■■□ 3.51
CDK11AQ9UQ88 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC36.99■■■■□ 3.51
CDK11AQ9UQ88 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC36.99■■■■□ 3.51
CDK11AQ9UQ88 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC36.98■■■■□ 3.51
CDK11AQ9UQ88 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC36.98■■■■□ 3.51
CDK11AQ9UQ88 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC36.98■■■■□ 3.51
CDK11AQ9UQ88 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC36.98■■■■□ 3.51
CDK11AQ9UQ88 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC36.98■■■■□ 3.51
CDK11AQ9UQ88 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC36.98■■■■□ 3.51
CDK11AQ9UQ88 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC36.97■■■■□ 3.51
CDK11AQ9UQ88 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC36.97■■■■□ 3.51
CDK11AQ9UQ88 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC36.97■■■■□ 3.51
CDK11AQ9UQ88 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC36.97■■■■□ 3.51
CDK11AQ9UQ88 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC36.96■■■■□ 3.51
CDK11AQ9UQ88 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC36.96■■■■□ 3.51
CDK11AQ9UQ88 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC36.95■■■■□ 3.51
CDK11AQ9UQ88 AF131216.4-201ENST00000638924 1588 ntBASIC36.95■■■■□ 3.51
CDK11AQ9UQ88 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC36.94■■■■□ 3.5
CDK11AQ9UQ88 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC36.94■■■■□ 3.5
CDK11AQ9UQ88 AC110285.6-201ENST00000617652 491 ntBASIC36.94■■■■□ 3.5
CDK11AQ9UQ88 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC36.94■■■■□ 3.5
CDK11AQ9UQ88 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC36.94■■■■□ 3.5
CDK11AQ9UQ88 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC36.94■■■■□ 3.5
CDK11AQ9UQ88 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC36.93■■■■□ 3.5
CDK11AQ9UQ88 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC36.93■■■■□ 3.5
CDK11AQ9UQ88 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC36.93■■■■□ 3.5
CDK11AQ9UQ88 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC36.93■■■■□ 3.5
CDK11AQ9UQ88 CLTA-210ENST00000540080 989 ntTSL 2 BASIC36.93■■■■□ 3.5
CDK11AQ9UQ88 MIR4466-201ENST00000606121 54 ntBASIC36.93■■■■□ 3.5
CDK11AQ9UQ88 AC142086.6-201ENST00000621154 1765 ntBASIC36.93■■■■□ 3.5
CDK11AQ9UQ88 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC36.92■■■■□ 3.5
CDK11AQ9UQ88 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC36.92■■■■□ 3.5
CDK11AQ9UQ88 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC36.92■■■■□ 3.5
CDK11AQ9UQ88 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC36.91■■■■□ 3.5
CDK11AQ9UQ88 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC36.9■■■■□ 3.5
CDK11AQ9UQ88 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC36.9■■■■□ 3.5
CDK11AQ9UQ88 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC36.9■■■■□ 3.5
CDK11AQ9UQ88 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC36.9■■■■□ 3.5
CDK11AQ9UQ88 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC36.9■■■■□ 3.5
CDK11AQ9UQ88 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC36.9■■■■□ 3.5
CDK11AQ9UQ88 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC36.89■■■■□ 3.5
CDK11AQ9UQ88 AL512631.2-201ENST00000604634 923 ntBASIC36.89■■■■□ 3.5
CDK11AQ9UQ88 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC36.88■■■■□ 3.49
CDK11AQ9UQ88 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC36.87■■■■□ 3.49
CDK11AQ9UQ88 AK3-203ENST00000447596 705 ntTSL 2 BASIC36.87■■■■□ 3.49
CDK11AQ9UQ88 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC36.87■■■■□ 3.49
CDK11AQ9UQ88 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC36.87■■■■□ 3.49
CDK11AQ9UQ88 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC36.87■■■■□ 3.49
CDK11AQ9UQ88 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC36.87■■■■□ 3.49
CDK11AQ9UQ88 FOXO3B-201ENST00000395675 1928 ntBASIC36.87■■■■□ 3.49
CDK11AQ9UQ88 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC36.86■■■■□ 3.49
CDK11AQ9UQ88 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC36.86■■■■□ 3.49
CDK11AQ9UQ88 QDPR-206ENST00000508623 601 ntTSL 3 BASIC36.86■■■■□ 3.49
CDK11AQ9UQ88 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC36.86■■■■□ 3.49
CDK11AQ9UQ88 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC36.86■■■■□ 3.49
CDK11AQ9UQ88 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC36.85■■■■□ 3.49
CDK11AQ9UQ88 AC096631.2-201ENST00000436136 790 ntBASIC36.85■■■■□ 3.49
CDK11AQ9UQ88 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC36.85■■■■□ 3.49
CDK11AQ9UQ88 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC36.85■■■■□ 3.49
CDK11AQ9UQ88 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC36.85■■■■□ 3.49
CDK11AQ9UQ88 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC36.84■■■■□ 3.49
CDK11AQ9UQ88 CD72-202ENST00000378430 585 ntTSL 3 BASIC36.84■■■■□ 3.49
CDK11AQ9UQ88 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC36.84■■■■□ 3.49
CDK11AQ9UQ88 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC36.83■■■■□ 3.49
CDK11AQ9UQ88 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC36.83■■■■□ 3.49
CDK11AQ9UQ88 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC36.83■■■■□ 3.49
CDK11AQ9UQ88 AC133561.4-201ENST00000566112 224 ntBASIC36.83■■■■□ 3.49
CDK11AQ9UQ88 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC36.83■■■■□ 3.49
CDK11AQ9UQ88 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC36.83■■■■□ 3.49
CDK11AQ9UQ88 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC36.83■■■■□ 3.49
CDK11AQ9UQ88 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC36.83■■■■□ 3.49
CDK11AQ9UQ88 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC36.83■■■■□ 3.49
CDK11AQ9UQ88 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC36.83■■■■□ 3.49
CDK11AQ9UQ88 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC36.83■■■■□ 3.49
CDK11AQ9UQ88 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC36.82■■■■□ 3.48
CDK11AQ9UQ88 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC36.82■■■■□ 3.48
CDK11AQ9UQ88 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC36.82■■■■□ 3.48
CDK11AQ9UQ88 AC005837.3-201ENST00000612163 286 ntBASIC36.82■■■■□ 3.48
CDK11AQ9UQ88 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC36.82■■■■□ 3.48
CDK11AQ9UQ88 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC36.82■■■■□ 3.48
CDK11AQ9UQ88 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC36.82■■■■□ 3.48
CDK11AQ9UQ88 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC36.81■■■■□ 3.48
CDK11AQ9UQ88 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC36.81■■■■□ 3.48
CDK11AQ9UQ88 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC36.8■■■■□ 3.48
CDK11AQ9UQ88 TFPT-201ENST00000391757 774 ntTSL 5 BASIC36.79■■■■□ 3.48
CDK11AQ9UQ88 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC36.79■■■■□ 3.48
CDK11AQ9UQ88 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC36.79■■■■□ 3.48
CDK11AQ9UQ88 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC36.78■■■■□ 3.48
CDK11AQ9UQ88 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC36.78■■■■□ 3.48
CDK11AQ9UQ88 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC36.78■■■■□ 3.48
CDK11AQ9UQ88 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC36.78■■■■□ 3.48
CDK11AQ9UQ88 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC36.77■■■■□ 3.48
CDK11AQ9UQ88 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC36.77■■■■□ 3.48
CDK11AQ9UQ88 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC36.76■■■■□ 3.48
CDK11AQ9UQ88 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC36.75■■■■□ 3.47
CDK11AQ9UQ88 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC36.75■■■■□ 3.47
CDK11AQ9UQ88 RASSF1-AS1-201ENST00000629828 790 ntBASIC36.75■■■■□ 3.47
CDK11AQ9UQ88 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC36.75■■■■□ 3.47
CDK11AQ9UQ88 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC36.74■■■■□ 3.47
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms