Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 AC120024.1-201ENST00000562672 995 ntBASIC19.64■□□□□ 0.73
CDC42EP3Q9UKI2 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
CDC42EP3Q9UKI2 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDC42EP3Q9UKI2 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDC42EP3Q9UKI2 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC19.63■□□□□ 0.73
CDC42EP3Q9UKI2 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.63■□□□□ 0.73
CDC42EP3Q9UKI2 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.63■□□□□ 0.73
CDC42EP3Q9UKI2 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.63■□□□□ 0.73
CDC42EP3Q9UKI2 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDC42EP3Q9UKI2 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDC42EP3Q9UKI2 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC19.62■□□□□ 0.73
CDC42EP3Q9UKI2 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC19.62■□□□□ 0.73
CDC42EP3Q9UKI2 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.62■□□□□ 0.73
CDC42EP3Q9UKI2 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CDC42EP3Q9UKI2 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDC42EP3Q9UKI2 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDC42EP3Q9UKI2 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDC42EP3Q9UKI2 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDC42EP3Q9UKI2 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.62■□□□□ 0.73
CDC42EP3Q9UKI2 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
CDC42EP3Q9UKI2 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.61■□□□□ 0.73
CDC42EP3Q9UKI2 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC19.61■□□□□ 0.73
CDC42EP3Q9UKI2 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CDC42EP3Q9UKI2 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDC42EP3Q9UKI2 SNAI3-AS1-204ENST00000567997 2048 ntBASIC19.6■□□□□ 0.73
CDC42EP3Q9UKI2 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDC42EP3Q9UKI2 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.6■□□□□ 0.73
CDC42EP3Q9UKI2 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.6■□□□□ 0.73
CDC42EP3Q9UKI2 AC005837.3-201ENST00000612163 286 ntBASIC19.6■□□□□ 0.73
CDC42EP3Q9UKI2 AL117332.1-201ENST00000622628 974 ntBASIC19.6■□□□□ 0.73
CDC42EP3Q9UKI2 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CDC42EP3Q9UKI2 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC19.59■□□□□ 0.73
CDC42EP3Q9UKI2 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDC42EP3Q9UKI2 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDC42EP3Q9UKI2 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDC42EP3Q9UKI2 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.59■□□□□ 0.73
CDC42EP3Q9UKI2 AL356740.2-201ENST00000601559 647 ntBASIC19.59■□□□□ 0.73
CDC42EP3Q9UKI2 AC010997.5-201ENST00000609182 354 ntBASIC19.59■□□□□ 0.73
CDC42EP3Q9UKI2 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDC42EP3Q9UKI2 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDC42EP3Q9UKI2 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CDC42EP3Q9UKI2 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CDC42EP3Q9UKI2 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDC42EP3Q9UKI2 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
CDC42EP3Q9UKI2 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDC42EP3Q9UKI2 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CDC42EP3Q9UKI2 AC133561.4-201ENST00000566112 224 ntBASIC19.58■□□□□ 0.72
CDC42EP3Q9UKI2 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.58■□□□□ 0.72
CDC42EP3Q9UKI2 MIR3621-201ENST00000580529 85 ntBASIC19.58■□□□□ 0.72
CDC42EP3Q9UKI2 MIR6724-1-201ENST00000616420 92 ntBASIC19.58■□□□□ 0.72
CDC42EP3Q9UKI2 MIR6724-2-201ENST00000616483 92 ntBASIC19.58■□□□□ 0.72
CDC42EP3Q9UKI2 MIR6724-4-201ENST00000617390 92 ntBASIC19.58■□□□□ 0.72
CDC42EP3Q9UKI2 AC110285.6-201ENST00000617652 491 ntBASIC19.58■□□□□ 0.72
CDC42EP3Q9UKI2 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CDC42EP3Q9UKI2 MIR6724-3-201ENST00000622482 92 ntBASIC19.58■□□□□ 0.72
CDC42EP3Q9UKI2 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CDC42EP3Q9UKI2 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDC42EP3Q9UKI2 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CDC42EP3Q9UKI2 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDC42EP3Q9UKI2 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDC42EP3Q9UKI2 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDC42EP3Q9UKI2 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDC42EP3Q9UKI2 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CDC42EP3Q9UKI2 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.57■□□□□ 0.72
CDC42EP3Q9UKI2 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.57■□□□□ 0.72
CDC42EP3Q9UKI2 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.57■□□□□ 0.72
CDC42EP3Q9UKI2 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDC42EP3Q9UKI2 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDC42EP3Q9UKI2 MTDHP2-201ENST00000601468 714 ntBASIC19.57■□□□□ 0.72
CDC42EP3Q9UKI2 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.57■□□□□ 0.72
CDC42EP3Q9UKI2 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDC42EP3Q9UKI2 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDC42EP3Q9UKI2 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDC42EP3Q9UKI2 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC19.57■□□□□ 0.72
CDC42EP3Q9UKI2 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDC42EP3Q9UKI2 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC19.56■□□□□ 0.72
CDC42EP3Q9UKI2 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CDC42EP3Q9UKI2 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDC42EP3Q9UKI2 AC096631.2-201ENST00000436136 790 ntBASIC19.56■□□□□ 0.72
CDC42EP3Q9UKI2 LINC01003-201ENST00000564834 1764 ntBASIC19.56■□□□□ 0.72
CDC42EP3Q9UKI2 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
CDC42EP3Q9UKI2 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CDC42EP3Q9UKI2 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDC42EP3Q9UKI2 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDC42EP3Q9UKI2 AL449106.1-201ENST00000608517 1980 ntBASIC19.55■□□□□ 0.72
CDC42EP3Q9UKI2 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDC42EP3Q9UKI2 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
CDC42EP3Q9UKI2 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.55■□□□□ 0.72
CDC42EP3Q9UKI2 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CDC42EP3Q9UKI2 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDC42EP3Q9UKI2 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CDC42EP3Q9UKI2 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDC42EP3Q9UKI2 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDC42EP3Q9UKI2 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDC42EP3Q9UKI2 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDC42EP3Q9UKI2 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CDC42EP3Q9UKI2 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC19.54■□□□□ 0.72
CDC42EP3Q9UKI2 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.54■□□□□ 0.72
CDC42EP3Q9UKI2 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDC42EP3Q9UKI2 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms