Protein–RNA interactions for Protein: Q9NZI6

TFCP2L1, Transcription factor CP2-like protein 1, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFCP2L1Q9NZI6 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC30.42■■■□□ 2.46
TFCP2L1Q9NZI6 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
TFCP2L1Q9NZI6 EDA-201ENST00000338901 1233 ntBASIC30.42■■■□□ 2.46
TFCP2L1Q9NZI6 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
TFCP2L1Q9NZI6 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC30.42■■■□□ 2.46
TFCP2L1Q9NZI6 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC30.42■■■□□ 2.46
TFCP2L1Q9NZI6 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
TFCP2L1Q9NZI6 ANKRD20A6P-201ENST00000618763 204 ntBASIC30.42■■■□□ 2.46
TFCP2L1Q9NZI6 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC30.42■■■□□ 2.46
TFCP2L1Q9NZI6 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
TFCP2L1Q9NZI6 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC30.41■■■□□ 2.46
TFCP2L1Q9NZI6 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC30.41■■■□□ 2.46
TFCP2L1Q9NZI6 AC105265.2-201ENST00000467189 838 ntBASIC30.41■■■□□ 2.46
TFCP2L1Q9NZI6 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC30.41■■■□□ 2.46
TFCP2L1Q9NZI6 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
TFCP2L1Q9NZI6 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
TFCP2L1Q9NZI6 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
TFCP2L1Q9NZI6 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
TFCP2L1Q9NZI6 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC30.39■■■□□ 2.46
TFCP2L1Q9NZI6 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC30.39■■■□□ 2.46
TFCP2L1Q9NZI6 AC024257.2-201ENST00000549699 147 ntBASIC30.39■■■□□ 2.46
TFCP2L1Q9NZI6 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC30.39■■■□□ 2.46
TFCP2L1Q9NZI6 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC30.39■■■□□ 2.45
TFCP2L1Q9NZI6 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC30.39■■■□□ 2.45
TFCP2L1Q9NZI6 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.45
TFCP2L1Q9NZI6 AF131216.4-201ENST00000638924 1588 ntBASIC30.38■■■□□ 2.45
TFCP2L1Q9NZI6 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
TFCP2L1Q9NZI6 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
TFCP2L1Q9NZI6 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
TFCP2L1Q9NZI6 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC30.37■■■□□ 2.45
TFCP2L1Q9NZI6 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
TFCP2L1Q9NZI6 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC30.37■■■□□ 2.45
TFCP2L1Q9NZI6 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC30.37■■■□□ 2.45
TFCP2L1Q9NZI6 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC30.37■■■□□ 2.45
TFCP2L1Q9NZI6 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC30.37■■■□□ 2.45
TFCP2L1Q9NZI6 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC30.36■■■□□ 2.45
TFCP2L1Q9NZI6 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
TFCP2L1Q9NZI6 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
TFCP2L1Q9NZI6 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC30.36■■■□□ 2.45
TFCP2L1Q9NZI6 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC30.36■■■□□ 2.45
TFCP2L1Q9NZI6 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
TFCP2L1Q9NZI6 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC30.35■■■□□ 2.45
TFCP2L1Q9NZI6 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
TFCP2L1Q9NZI6 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC30.35■■■□□ 2.45
TFCP2L1Q9NZI6 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
TFCP2L1Q9NZI6 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC30.34■■■□□ 2.45
TFCP2L1Q9NZI6 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
TFCP2L1Q9NZI6 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
TFCP2L1Q9NZI6 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
TFCP2L1Q9NZI6 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC30.34■■■□□ 2.45
TFCP2L1Q9NZI6 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC30.34■■■□□ 2.45
TFCP2L1Q9NZI6 AC139426.1-201ENST00000568218 2529 ntBASIC30.33■■■□□ 2.45
TFCP2L1Q9NZI6 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC30.33■■■□□ 2.45
TFCP2L1Q9NZI6 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
TFCP2L1Q9NZI6 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC30.33■■■□□ 2.45
TFCP2L1Q9NZI6 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
TFCP2L1Q9NZI6 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC30.33■■■□□ 2.45
TFCP2L1Q9NZI6 MIR6821-201ENST00000617625 74 ntBASIC30.33■■■□□ 2.45
TFCP2L1Q9NZI6 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC30.33■■■□□ 2.45
TFCP2L1Q9NZI6 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC30.32■■■□□ 2.44
TFCP2L1Q9NZI6 CLTA-206ENST00000466396 695 ntTSL 2 BASIC30.32■■■□□ 2.44
TFCP2L1Q9NZI6 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC30.32■■■□□ 2.44
TFCP2L1Q9NZI6 AL136967.2-201ENST00000623968 743 ntBASIC30.32■■■□□ 2.44
TFCP2L1Q9NZI6 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
TFCP2L1Q9NZI6 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC30.31■■■□□ 2.44
TFCP2L1Q9NZI6 SRD5A1P1-201ENST00000442297 786 ntBASIC30.31■■■□□ 2.44
TFCP2L1Q9NZI6 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC30.31■■■□□ 2.44
TFCP2L1Q9NZI6 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC30.3■■■□□ 2.44
TFCP2L1Q9NZI6 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC30.3■■■□□ 2.44
TFCP2L1Q9NZI6 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC30.3■■■□□ 2.44
TFCP2L1Q9NZI6 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC30.29■■■□□ 2.44
TFCP2L1Q9NZI6 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC30.29■■■□□ 2.44
TFCP2L1Q9NZI6 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
TFCP2L1Q9NZI6 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC30.29■■■□□ 2.44
TFCP2L1Q9NZI6 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC30.29■■■□□ 2.44
TFCP2L1Q9NZI6 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
TFCP2L1Q9NZI6 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC30.28■■■□□ 2.44
TFCP2L1Q9NZI6 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC30.28■■■□□ 2.44
TFCP2L1Q9NZI6 GLI3-203ENST00000437480 451 ntTSL 2 BASIC30.28■■■□□ 2.44
TFCP2L1Q9NZI6 AF213884.3-201ENST00000563833 479 ntBASIC30.28■■■□□ 2.44
TFCP2L1Q9NZI6 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
TFCP2L1Q9NZI6 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
TFCP2L1Q9NZI6 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
TFCP2L1Q9NZI6 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
TFCP2L1Q9NZI6 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
TFCP2L1Q9NZI6 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC30.27■■■□□ 2.44
TFCP2L1Q9NZI6 AC097381.1-201ENST00000429019 1296 ntBASIC30.27■■■□□ 2.44
TFCP2L1Q9NZI6 GRAMD4P4-201ENST00000613563 1115 ntBASIC30.27■■■□□ 2.44
TFCP2L1Q9NZI6 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC30.27■■■□□ 2.44
TFCP2L1Q9NZI6 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC30.26■■■□□ 2.44
TFCP2L1Q9NZI6 RBM38-205ENST00000440234 686 ntTSL 2 BASIC30.26■■■□□ 2.43
TFCP2L1Q9NZI6 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC30.26■■■□□ 2.43
TFCP2L1Q9NZI6 SSSCA1-AS1-201ENST00000567594 614 ntBASIC30.26■■■□□ 2.43
TFCP2L1Q9NZI6 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
TFCP2L1Q9NZI6 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC30.26■■■□□ 2.43
TFCP2L1Q9NZI6 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC30.25■■■□□ 2.43
TFCP2L1Q9NZI6 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC30.25■■■□□ 2.43
TFCP2L1Q9NZI6 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC30.25■■■□□ 2.43
TFCP2L1Q9NZI6 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC30.25■■■□□ 2.43
TFCP2L1Q9NZI6 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC30.24■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms