Protein–RNA interactions for Protein: Q9H7M6

ZSWIM4, Zinc finger SWIM domain-containing protein 4, humanhuman

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM4Q9H7M6 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC26.65■■□□□ 1.86
ZSWIM4Q9H7M6 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
ZSWIM4Q9H7M6 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
ZSWIM4Q9H7M6 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
ZSWIM4Q9H7M6 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
ZSWIM4Q9H7M6 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.85
ZSWIM4Q9H7M6 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.85
ZSWIM4Q9H7M6 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
ZSWIM4Q9H7M6 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC26.63■■□□□ 1.85
ZSWIM4Q9H7M6 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
ZSWIM4Q9H7M6 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.63■■□□□ 1.85
ZSWIM4Q9H7M6 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC26.63■■□□□ 1.85
ZSWIM4Q9H7M6 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC26.63■■□□□ 1.85
ZSWIM4Q9H7M6 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
ZSWIM4Q9H7M6 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC26.63■■□□□ 1.85
ZSWIM4Q9H7M6 AC097639.1-201ENST00000565519 1891 ntBASIC26.63■■□□□ 1.85
ZSWIM4Q9H7M6 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
ZSWIM4Q9H7M6 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
ZSWIM4Q9H7M6 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
ZSWIM4Q9H7M6 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
ZSWIM4Q9H7M6 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
ZSWIM4Q9H7M6 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
ZSWIM4Q9H7M6 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
ZSWIM4Q9H7M6 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
ZSWIM4Q9H7M6 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
ZSWIM4Q9H7M6 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC26.62■■□□□ 1.85
ZSWIM4Q9H7M6 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
ZSWIM4Q9H7M6 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
ZSWIM4Q9H7M6 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
ZSWIM4Q9H7M6 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
ZSWIM4Q9H7M6 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC26.61■■□□□ 1.85
ZSWIM4Q9H7M6 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
ZSWIM4Q9H7M6 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
ZSWIM4Q9H7M6 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
ZSWIM4Q9H7M6 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
ZSWIM4Q9H7M6 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
ZSWIM4Q9H7M6 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC26.6■■□□□ 1.85
ZSWIM4Q9H7M6 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
ZSWIM4Q9H7M6 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
ZSWIM4Q9H7M6 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
ZSWIM4Q9H7M6 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC26.59■■□□□ 1.85
ZSWIM4Q9H7M6 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC26.59■■□□□ 1.85
ZSWIM4Q9H7M6 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC26.58■■□□□ 1.85
ZSWIM4Q9H7M6 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC26.58■■□□□ 1.85
ZSWIM4Q9H7M6 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC26.58■■□□□ 1.85
ZSWIM4Q9H7M6 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
ZSWIM4Q9H7M6 AC103834.1-201ENST00000520383 144 ntBASIC26.58■■□□□ 1.85
ZSWIM4Q9H7M6 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC26.58■■□□□ 1.85
ZSWIM4Q9H7M6 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC26.58■■□□□ 1.85
ZSWIM4Q9H7M6 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC26.58■■□□□ 1.85
ZSWIM4Q9H7M6 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC26.57■■□□□ 1.84
ZSWIM4Q9H7M6 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC26.57■■□□□ 1.84
ZSWIM4Q9H7M6 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
ZSWIM4Q9H7M6 RARRES2P1-201ENST00000474487 481 ntBASIC26.57■■□□□ 1.84
ZSWIM4Q9H7M6 MIR4508-201ENST00000584178 70 ntBASIC26.57■■□□□ 1.84
ZSWIM4Q9H7M6 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
ZSWIM4Q9H7M6 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
ZSWIM4Q9H7M6 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC26.56■■□□□ 1.84
ZSWIM4Q9H7M6 KRT8P33-201ENST00000508125 1423 ntBASIC26.56■■□□□ 1.84
ZSWIM4Q9H7M6 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
ZSWIM4Q9H7M6 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
ZSWIM4Q9H7M6 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC26.56■■□□□ 1.84
ZSWIM4Q9H7M6 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
ZSWIM4Q9H7M6 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
ZSWIM4Q9H7M6 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
ZSWIM4Q9H7M6 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC26.55■■□□□ 1.84
ZSWIM4Q9H7M6 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC26.55■■□□□ 1.84
ZSWIM4Q9H7M6 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC26.55■■□□□ 1.84
ZSWIM4Q9H7M6 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
ZSWIM4Q9H7M6 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
ZSWIM4Q9H7M6 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
ZSWIM4Q9H7M6 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
ZSWIM4Q9H7M6 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC26.54■■□□□ 1.84
ZSWIM4Q9H7M6 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
ZSWIM4Q9H7M6 YBX1P4-201ENST00000392794 808 ntBASIC26.54■■□□□ 1.84
ZSWIM4Q9H7M6 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC26.54■■□□□ 1.84
ZSWIM4Q9H7M6 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC26.54■■□□□ 1.84
ZSWIM4Q9H7M6 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
ZSWIM4Q9H7M6 AC093323.1-202ENST00000635031 2045 ntBASIC26.53■■□□□ 1.84
ZSWIM4Q9H7M6 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
ZSWIM4Q9H7M6 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC26.53■■□□□ 1.84
ZSWIM4Q9H7M6 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC26.53■■□□□ 1.84
ZSWIM4Q9H7M6 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC26.53■■□□□ 1.84
ZSWIM4Q9H7M6 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
ZSWIM4Q9H7M6 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
ZSWIM4Q9H7M6 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC26.53■■□□□ 1.84
ZSWIM4Q9H7M6 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
ZSWIM4Q9H7M6 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC26.53■■□□□ 1.84
ZSWIM4Q9H7M6 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
ZSWIM4Q9H7M6 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
ZSWIM4Q9H7M6 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
ZSWIM4Q9H7M6 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
ZSWIM4Q9H7M6 AC022616.5-201ENST00000518796 181 ntBASIC26.52■■□□□ 1.84
ZSWIM4Q9H7M6 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
ZSWIM4Q9H7M6 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
ZSWIM4Q9H7M6 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
ZSWIM4Q9H7M6 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC26.51■■□□□ 1.83
ZSWIM4Q9H7M6 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC26.51■■□□□ 1.83
ZSWIM4Q9H7M6 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC26.51■■□□□ 1.83
ZSWIM4Q9H7M6 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms