Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
CDH23Q9H251 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CDH23Q9H251 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC25.58■■□□□ 1.69
CDH23Q9H251 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC25.57■■□□□ 1.68
CDH23Q9H251 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CDH23Q9H251 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
CDH23Q9H251 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
CDH23Q9H251 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC25.57■■□□□ 1.68
CDH23Q9H251 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
CDH23Q9H251 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CDH23Q9H251 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
CDH23Q9H251 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
CDH23Q9H251 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC25.56■■□□□ 1.68
CDH23Q9H251 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC25.56■■□□□ 1.68
CDH23Q9H251 AC011551.1-201ENST00000614101 683 ntBASIC25.56■■□□□ 1.68
CDH23Q9H251 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC25.56■■□□□ 1.68
CDH23Q9H251 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
CDH23Q9H251 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC25.55■■□□□ 1.68
CDH23Q9H251 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CDH23Q9H251 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CDH23Q9H251 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
CDH23Q9H251 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC25.54■■□□□ 1.68
CDH23Q9H251 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC25.54■■□□□ 1.68
CDH23Q9H251 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
CDH23Q9H251 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CDH23Q9H251 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CDH23Q9H251 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
CDH23Q9H251 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CDH23Q9H251 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CDH23Q9H251 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CDH23Q9H251 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CDH23Q9H251 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CDH23Q9H251 CD72-202ENST00000378430 585 ntTSL 3 BASIC25.52■■□□□ 1.68
CDH23Q9H251 AF213884.3-201ENST00000563833 479 ntBASIC25.5■■□□□ 1.67
CDH23Q9H251 IKBKGP1-201ENST00000612193 1073 ntBASIC25.5■■□□□ 1.67
CDH23Q9H251 AC091305.1-201ENST00000479476 895 ntBASIC25.5■■□□□ 1.67
CDH23Q9H251 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC25.5■■□□□ 1.67
CDH23Q9H251 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC25.5■■□□□ 1.67
CDH23Q9H251 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CDH23Q9H251 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CDH23Q9H251 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC25.49■■□□□ 1.67
CDH23Q9H251 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
CDH23Q9H251 AC092437.1-201ENST00000624794 1048 ntBASIC25.48■■□□□ 1.67
CDH23Q9H251 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
CDH23Q9H251 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CDH23Q9H251 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
CDH23Q9H251 RBM38-205ENST00000440234 686 ntTSL 2 BASIC25.47■■□□□ 1.67
CDH23Q9H251 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC25.47■■□□□ 1.67
CDH23Q9H251 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC25.47■■□□□ 1.67
CDH23Q9H251 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC25.47■■□□□ 1.67
CDH23Q9H251 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
CDH23Q9H251 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC25.47■■□□□ 1.67
CDH23Q9H251 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CDH23Q9H251 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
CDH23Q9H251 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC25.47■■□□□ 1.67
CDH23Q9H251 CLTA-210ENST00000540080 989 ntTSL 2 BASIC25.47■■□□□ 1.67
CDH23Q9H251 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CDH23Q9H251 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CDH23Q9H251 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
CDH23Q9H251 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC25.47■■□□□ 1.67
CDH23Q9H251 AL136162.1-201ENST00000607711 1078 ntBASIC25.47■■□□□ 1.67
CDH23Q9H251 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
CDH23Q9H251 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CDH23Q9H251 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CDH23Q9H251 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.67
CDH23Q9H251 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
CDH23Q9H251 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
CDH23Q9H251 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CDH23Q9H251 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC25.44■■□□□ 1.66
CDH23Q9H251 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC25.44■■□□□ 1.66
CDH23Q9H251 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
CDH23Q9H251 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
CDH23Q9H251 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC25.43■■□□□ 1.66
CDH23Q9H251 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
CDH23Q9H251 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC25.43■■□□□ 1.66
CDH23Q9H251 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC25.43■■□□□ 1.66
CDH23Q9H251 STOX2-205ENST00000513034 807 ntTSL 3 BASIC25.43■■□□□ 1.66
CDH23Q9H251 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CDH23Q9H251 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC25.42■■□□□ 1.66
CDH23Q9H251 CLTA-206ENST00000466396 695 ntTSL 2 BASIC25.42■■□□□ 1.66
CDH23Q9H251 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC25.42■■□□□ 1.66
CDH23Q9H251 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC25.42■■□□□ 1.66
CDH23Q9H251 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
CDH23Q9H251 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
CDH23Q9H251 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
CDH23Q9H251 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC25.41■■□□□ 1.66
CDH23Q9H251 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC25.41■■□□□ 1.66
CDH23Q9H251 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC25.41■■□□□ 1.66
CDH23Q9H251 MAG-206ENST00000597035 542 ntTSL 4 BASIC25.41■■□□□ 1.66
CDH23Q9H251 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC25.41■■□□□ 1.66
CDH23Q9H251 GAK-223ENST00000628912 497 ntTSL 5 BASIC25.41■■□□□ 1.66
CDH23Q9H251 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CDH23Q9H251 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CDH23Q9H251 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CDH23Q9H251 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CDH23Q9H251 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC25.4■■□□□ 1.66
CDH23Q9H251 ESRRAP2-201ENST00000418437 1549 ntBASIC25.4■■□□□ 1.66
CDH23Q9H251 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
CDH23Q9H251 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CDH23Q9H251 GRAMD4P4-201ENST00000613563 1115 ntBASIC25.4■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 149.2 ms