Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FOXC2Q99958 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.02■□□□□ 0.8
FOXC2Q99958 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FOXC2Q99958 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
FOXC2Q99958 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.02■□□□□ 0.8
FOXC2Q99958 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.02■□□□□ 0.8
FOXC2Q99958 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.02■□□□□ 0.8
FOXC2Q99958 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FOXC2Q99958 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
FOXC2Q99958 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FOXC2Q99958 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FOXC2Q99958 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FOXC2Q99958 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.01■□□□□ 0.79
FOXC2Q99958 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FOXC2Q99958 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FOXC2Q99958 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
FOXC2Q99958 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FOXC2Q99958 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FOXC2Q99958 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FOXC2Q99958 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FOXC2Q99958 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
FOXC2Q99958 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FOXC2Q99958 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20■□□□□ 0.79
FOXC2Q99958 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20■□□□□ 0.79
FOXC2Q99958 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20■□□□□ 0.79
FOXC2Q99958 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
FOXC2Q99958 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FOXC2Q99958 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20■□□□□ 0.79
FOXC2Q99958 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
FOXC2Q99958 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
FOXC2Q99958 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
FOXC2Q99958 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
FOXC2Q99958 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
FOXC2Q99958 AC097381.1-201ENST00000429019 1296 ntBASIC19.99■□□□□ 0.79
FOXC2Q99958 AC024257.2-201ENST00000549699 147 ntBASIC19.99■□□□□ 0.79
FOXC2Q99958 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC19.99■□□□□ 0.79
FOXC2Q99958 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
FOXC2Q99958 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
FOXC2Q99958 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
FOXC2Q99958 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
FOXC2Q99958 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
FOXC2Q99958 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.98■□□□□ 0.79
FOXC2Q99958 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC19.98■□□□□ 0.79
FOXC2Q99958 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
FOXC2Q99958 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
FOXC2Q99958 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
FOXC2Q99958 SRD5A1P1-201ENST00000442297 786 ntBASIC19.97■□□□□ 0.79
FOXC2Q99958 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.97■□□□□ 0.79
FOXC2Q99958 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
FOXC2Q99958 AL136967.2-201ENST00000623968 743 ntBASIC19.97■□□□□ 0.79
FOXC2Q99958 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.97■□□□□ 0.79
FOXC2Q99958 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
FOXC2Q99958 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
FOXC2Q99958 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
FOXC2Q99958 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
FOXC2Q99958 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
FOXC2Q99958 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
FOXC2Q99958 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.96■□□□□ 0.79
FOXC2Q99958 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
FOXC2Q99958 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
FOXC2Q99958 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
FOXC2Q99958 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
FOXC2Q99958 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.95■□□□□ 0.78
FOXC2Q99958 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
FOXC2Q99958 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.95■□□□□ 0.78
FOXC2Q99958 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.95■□□□□ 0.78
FOXC2Q99958 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.95■□□□□ 0.78
FOXC2Q99958 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.95■□□□□ 0.78
FOXC2Q99958 MIR6722-201ENST00000617286 78 ntBASIC19.95■□□□□ 0.78
FOXC2Q99958 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
FOXC2Q99958 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
FOXC2Q99958 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FOXC2Q99958 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
FOXC2Q99958 AL162430.1-201ENST00000480705 870 ntBASIC19.94■□□□□ 0.78
FOXC2Q99958 PROC-203ENST00000409048 1586 ntTSL 5 BASIC19.94■□□□□ 0.78
FOXC2Q99958 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
FOXC2Q99958 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
FOXC2Q99958 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
FOXC2Q99958 AF131216.4-201ENST00000638924 1588 ntBASIC19.93■□□□□ 0.78
FOXC2Q99958 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
FOXC2Q99958 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.93■□□□□ 0.78
FOXC2Q99958 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
FOXC2Q99958 AF213884.3-201ENST00000563833 479 ntBASIC19.93■□□□□ 0.78
FOXC2Q99958 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.93■□□□□ 0.78
FOXC2Q99958 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.93■□□□□ 0.78
FOXC2Q99958 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.93■□□□□ 0.78
FOXC2Q99958 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
FOXC2Q99958 MIR939-201ENST00000401314 82 ntBASIC19.92■□□□□ 0.78
FOXC2Q99958 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
FOXC2Q99958 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
FOXC2Q99958 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.92■□□□□ 0.78
FOXC2Q99958 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
FOXC2Q99958 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
FOXC2Q99958 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
FOXC2Q99958 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
FOXC2Q99958 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.91■□□□□ 0.78
FOXC2Q99958 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
FOXC2Q99958 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
FOXC2Q99958 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
FOXC2Q99958 ABCB10P1-201ENST00000614297 2181 ntBASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms