Protein–RNA interactions for Protein: Q99435

NELL2, Protein kinase C-binding protein NELL2, humanhuman

Predictions only

Length 816 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELL2Q99435 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC24.16■■□□□ 1.46
NELL2Q99435 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC24.16■■□□□ 1.46
NELL2Q99435 LINC01003-201ENST00000564834 1764 ntBASIC24.16■■□□□ 1.46
NELL2Q99435 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
NELL2Q99435 GUK1-205ENST00000366722 850 ntTSL 3 BASIC24.15■■□□□ 1.46
NELL2Q99435 CD72-202ENST00000378430 585 ntTSL 3 BASIC24.15■■□□□ 1.46
NELL2Q99435 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
NELL2Q99435 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
NELL2Q99435 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
NELL2Q99435 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
NELL2Q99435 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
NELL2Q99435 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC24.15■■□□□ 1.46
NELL2Q99435 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.45
NELL2Q99435 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
NELL2Q99435 TFPT-201ENST00000391757 774 ntTSL 5 BASIC24.14■■□□□ 1.45
NELL2Q99435 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
NELL2Q99435 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC24.14■■□□□ 1.45
NELL2Q99435 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
NELL2Q99435 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.45
NELL2Q99435 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
NELL2Q99435 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
NELL2Q99435 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC24.13■■□□□ 1.45
NELL2Q99435 AC142381.2-201ENST00000566120 298 ntBASIC24.13■■□□□ 1.45
NELL2Q99435 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC24.13■■□□□ 1.45
NELL2Q99435 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
NELL2Q99435 AC092666.2-201ENST00000613287 246 ntBASIC24.12■■□□□ 1.45
NELL2Q99435 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
NELL2Q99435 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
NELL2Q99435 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
NELL2Q99435 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
NELL2Q99435 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
NELL2Q99435 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
NELL2Q99435 RARRES2P6-201ENST00000567333 442 ntBASIC24.11■■□□□ 1.45
NELL2Q99435 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC24.1■■□□□ 1.45
NELL2Q99435 DRD5P2-201ENST00000421395 2012 ntBASIC24.1■■□□□ 1.45
NELL2Q99435 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
NELL2Q99435 SNAI3-AS1-204ENST00000567997 2048 ntBASIC24.1■■□□□ 1.45
NELL2Q99435 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC24.1■■□□□ 1.45
NELL2Q99435 ZNRF2P3-201ENST00000424200 374 ntBASIC24.1■■□□□ 1.45
NELL2Q99435 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC24.1■■□□□ 1.45
NELL2Q99435 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
NELL2Q99435 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
NELL2Q99435 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC24.1■■□□□ 1.45
NELL2Q99435 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
NELL2Q99435 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
NELL2Q99435 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
NELL2Q99435 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
NELL2Q99435 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC24.09■■□□□ 1.45
NELL2Q99435 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
NELL2Q99435 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
NELL2Q99435 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
NELL2Q99435 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
NELL2Q99435 RASSF1-AS1-201ENST00000629828 790 ntBASIC24.09■■□□□ 1.45
NELL2Q99435 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
NELL2Q99435 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
NELL2Q99435 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
NELL2Q99435 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
NELL2Q99435 AF131216.4-201ENST00000638924 1588 ntBASIC24.08■■□□□ 1.44
NELL2Q99435 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
NELL2Q99435 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
NELL2Q99435 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
NELL2Q99435 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC24.07■■□□□ 1.44
NELL2Q99435 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC24.07■■□□□ 1.44
NELL2Q99435 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC24.07■■□□□ 1.44
NELL2Q99435 MIR6722-201ENST00000617286 78 ntBASIC24.07■■□□□ 1.44
NELL2Q99435 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC24.07■■□□□ 1.44
NELL2Q99435 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC24.07■■□□□ 1.44
NELL2Q99435 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
NELL2Q99435 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
NELL2Q99435 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
NELL2Q99435 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
NELL2Q99435 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
NELL2Q99435 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
NELL2Q99435 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
NELL2Q99435 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
NELL2Q99435 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
NELL2Q99435 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
NELL2Q99435 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
NELL2Q99435 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
NELL2Q99435 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
NELL2Q99435 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC24.05■■□□□ 1.44
NELL2Q99435 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
NELL2Q99435 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
NELL2Q99435 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC24.04■■□□□ 1.44
NELL2Q99435 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
NELL2Q99435 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
NELL2Q99435 UNC93B3-201ENST00000308076 687 ntBASIC24.04■■□□□ 1.44
NELL2Q99435 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
NELL2Q99435 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC24.04■■□□□ 1.44
NELL2Q99435 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
NELL2Q99435 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC24.04■■□□□ 1.44
NELL2Q99435 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC24.03■■□□□ 1.44
NELL2Q99435 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC24.03■■□□□ 1.44
NELL2Q99435 SUDS3P1-201ENST00000505831 966 ntBASIC24.03■■□□□ 1.44
NELL2Q99435 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
NELL2Q99435 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC24.03■■□□□ 1.44
NELL2Q99435 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC24.02■■□□□ 1.44
NELL2Q99435 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
NELL2Q99435 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
NELL2Q99435 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC24.02■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms