Protein–RNA interactions for Protein: Q96HR8

NAF1, H/ACA ribonucleoprotein complex non-core subunit NAF1, humanhuman

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NAF1Q96HR8 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
NAF1Q96HR8 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
NAF1Q96HR8 AC093536.1-201ENST00000569153 554 ntBASIC23.63■■□□□ 1.37
NAF1Q96HR8 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
NAF1Q96HR8 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
NAF1Q96HR8 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
NAF1Q96HR8 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
NAF1Q96HR8 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC23.62■■□□□ 1.37
NAF1Q96HR8 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
NAF1Q96HR8 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC23.61■■□□□ 1.37
NAF1Q96HR8 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
NAF1Q96HR8 HES6-204ENST00000409182 863 ntTSL 2 BASIC23.61■■□□□ 1.37
NAF1Q96HR8 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
NAF1Q96HR8 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
NAF1Q96HR8 AC074183.2-201ENST00000623112 922 ntBASIC23.61■■□□□ 1.37
NAF1Q96HR8 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
NAF1Q96HR8 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
NAF1Q96HR8 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.61■■□□□ 1.37
NAF1Q96HR8 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
NAF1Q96HR8 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
NAF1Q96HR8 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
NAF1Q96HR8 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
NAF1Q96HR8 AC068473.5-201ENST00000616428 2072 ntBASIC23.6■■□□□ 1.37
NAF1Q96HR8 AC103834.1-201ENST00000520383 144 ntBASIC23.59■■□□□ 1.37
NAF1Q96HR8 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
NAF1Q96HR8 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
NAF1Q96HR8 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
NAF1Q96HR8 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
NAF1Q96HR8 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
NAF1Q96HR8 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
NAF1Q96HR8 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
NAF1Q96HR8 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC23.58■■□□□ 1.37
NAF1Q96HR8 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
NAF1Q96HR8 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
NAF1Q96HR8 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.36
NAF1Q96HR8 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.58■■□□□ 1.36
NAF1Q96HR8 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
NAF1Q96HR8 MIR6765-201ENST00000614092 87 ntBASIC23.57■■□□□ 1.36
NAF1Q96HR8 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC23.57■■□□□ 1.36
NAF1Q96HR8 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.57■■□□□ 1.36
NAF1Q96HR8 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC23.56■■□□□ 1.36
NAF1Q96HR8 GUSBP5-201ENST00000418136 578 ntBASIC23.56■■□□□ 1.36
NAF1Q96HR8 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC23.56■■□□□ 1.36
NAF1Q96HR8 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
NAF1Q96HR8 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC23.56■■□□□ 1.36
NAF1Q96HR8 AC025884.2-201ENST00000553429 711 ntBASIC23.56■■□□□ 1.36
NAF1Q96HR8 PVT1_1.1-201ENST00000615125 194 ntBASIC23.56■■□□□ 1.36
NAF1Q96HR8 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
NAF1Q96HR8 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
NAF1Q96HR8 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
NAF1Q96HR8 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
NAF1Q96HR8 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC23.56■■□□□ 1.36
NAF1Q96HR8 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
NAF1Q96HR8 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
NAF1Q96HR8 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.55■■□□□ 1.36
NAF1Q96HR8 OR2A1-AS1-204ENST00000470435 602 ntBASIC23.55■■□□□ 1.36
NAF1Q96HR8 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC23.55■■□□□ 1.36
NAF1Q96HR8 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC23.55■■□□□ 1.36
NAF1Q96HR8 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
NAF1Q96HR8 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
NAF1Q96HR8 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
NAF1Q96HR8 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
NAF1Q96HR8 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC23.55■■□□□ 1.36
NAF1Q96HR8 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
NAF1Q96HR8 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
NAF1Q96HR8 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
NAF1Q96HR8 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
NAF1Q96HR8 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.54■■□□□ 1.36
NAF1Q96HR8 HYI-210ENST00000486909 905 ntTSL 5 BASIC23.54■■□□□ 1.36
NAF1Q96HR8 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC23.54■■□□□ 1.36
NAF1Q96HR8 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC23.54■■□□□ 1.36
NAF1Q96HR8 RAP2CP1-202ENST00000605179 643 ntBASIC23.54■■□□□ 1.36
NAF1Q96HR8 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
NAF1Q96HR8 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
NAF1Q96HR8 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
NAF1Q96HR8 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC23.53■■□□□ 1.36
NAF1Q96HR8 CASK-201ENST00000378154 2494 ntTSL 5 BASIC23.53■■□□□ 1.36
NAF1Q96HR8 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
NAF1Q96HR8 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
NAF1Q96HR8 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
NAF1Q96HR8 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
NAF1Q96HR8 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
NAF1Q96HR8 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
NAF1Q96HR8 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
NAF1Q96HR8 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC23.52■■□□□ 1.36
NAF1Q96HR8 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC23.52■■□□□ 1.36
NAF1Q96HR8 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
NAF1Q96HR8 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
NAF1Q96HR8 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC23.52■■□□□ 1.36
NAF1Q96HR8 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
NAF1Q96HR8 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
NAF1Q96HR8 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
NAF1Q96HR8 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
NAF1Q96HR8 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
NAF1Q96HR8 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
NAF1Q96HR8 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
NAF1Q96HR8 AC018755.3-202ENST00000596210 929 ntBASIC23.51■■□□□ 1.35
NAF1Q96HR8 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
NAF1Q96HR8 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
NAF1Q96HR8 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms