Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC31.36■■■□□ 2.61
RAPGEF4Q8WZA2 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC31.36■■■□□ 2.61
RAPGEF4Q8WZA2 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC31.36■■■□□ 2.61
RAPGEF4Q8WZA2 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
RAPGEF4Q8WZA2 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC31.36■■■□□ 2.61
RAPGEF4Q8WZA2 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC31.36■■■□□ 2.61
RAPGEF4Q8WZA2 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC31.36■■■□□ 2.61
RAPGEF4Q8WZA2 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
RAPGEF4Q8WZA2 EXOG-217ENST00000630638 197 ntTSL 5 BASIC31.36■■■□□ 2.61
RAPGEF4Q8WZA2 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC31.36■■■□□ 2.61
RAPGEF4Q8WZA2 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC31.36■■■□□ 2.61
RAPGEF4Q8WZA2 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC31.35■■■□□ 2.61
RAPGEF4Q8WZA2 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC31.35■■■□□ 2.61
RAPGEF4Q8WZA2 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC31.35■■■□□ 2.61
RAPGEF4Q8WZA2 AL356740.2-201ENST00000601559 647 ntBASIC31.35■■■□□ 2.61
RAPGEF4Q8WZA2 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC31.35■■■□□ 2.61
RAPGEF4Q8WZA2 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC31.34■■■□□ 2.61
RAPGEF4Q8WZA2 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC31.34■■■□□ 2.61
RAPGEF4Q8WZA2 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
RAPGEF4Q8WZA2 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
RAPGEF4Q8WZA2 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
RAPGEF4Q8WZA2 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC31.33■■■□□ 2.61
RAPGEF4Q8WZA2 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC31.33■■■□□ 2.61
RAPGEF4Q8WZA2 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC31.33■■■□□ 2.61
RAPGEF4Q8WZA2 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
RAPGEF4Q8WZA2 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC31.32■■■□□ 2.6
RAPGEF4Q8WZA2 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
RAPGEF4Q8WZA2 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
RAPGEF4Q8WZA2 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC31.32■■■□□ 2.6
RAPGEF4Q8WZA2 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
RAPGEF4Q8WZA2 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
RAPGEF4Q8WZA2 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC31.31■■■□□ 2.6
RAPGEF4Q8WZA2 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
RAPGEF4Q8WZA2 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC31.31■■■□□ 2.6
RAPGEF4Q8WZA2 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC31.31■■■□□ 2.6
RAPGEF4Q8WZA2 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC31.31■■■□□ 2.6
RAPGEF4Q8WZA2 CLTA-210ENST00000540080 989 ntTSL 2 BASIC31.31■■■□□ 2.6
RAPGEF4Q8WZA2 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC31.31■■■□□ 2.6
RAPGEF4Q8WZA2 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC31.31■■■□□ 2.6
RAPGEF4Q8WZA2 AF131216.4-201ENST00000638924 1588 ntBASIC31.3■■■□□ 2.6
RAPGEF4Q8WZA2 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC31.3■■■□□ 2.6
RAPGEF4Q8WZA2 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC31.3■■■□□ 2.6
RAPGEF4Q8WZA2 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC31.3■■■□□ 2.6
RAPGEF4Q8WZA2 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
RAPGEF4Q8WZA2 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
RAPGEF4Q8WZA2 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC31.29■■■□□ 2.6
RAPGEF4Q8WZA2 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
RAPGEF4Q8WZA2 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC31.29■■■□□ 2.6
RAPGEF4Q8WZA2 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC31.28■■■□□ 2.6
RAPGEF4Q8WZA2 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
RAPGEF4Q8WZA2 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC31.28■■■□□ 2.6
RAPGEF4Q8WZA2 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
RAPGEF4Q8WZA2 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
RAPGEF4Q8WZA2 FOXO3B-201ENST00000395675 1928 ntBASIC31.28■■■□□ 2.6
RAPGEF4Q8WZA2 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC31.27■■■□□ 2.6
RAPGEF4Q8WZA2 MIR4466-201ENST00000606121 54 ntBASIC31.27■■■□□ 2.6
RAPGEF4Q8WZA2 AC110285.6-201ENST00000617652 491 ntBASIC31.27■■■□□ 2.6
RAPGEF4Q8WZA2 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC31.27■■■□□ 2.6
RAPGEF4Q8WZA2 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
RAPGEF4Q8WZA2 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC31.26■■■□□ 2.6
RAPGEF4Q8WZA2 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
RAPGEF4Q8WZA2 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC31.26■■■□□ 2.59
RAPGEF4Q8WZA2 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC31.26■■■□□ 2.59
RAPGEF4Q8WZA2 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
RAPGEF4Q8WZA2 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC31.26■■■□□ 2.59
RAPGEF4Q8WZA2 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
RAPGEF4Q8WZA2 AK3-203ENST00000447596 705 ntTSL 2 BASIC31.25■■■□□ 2.59
RAPGEF4Q8WZA2 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC31.25■■■□□ 2.59
RAPGEF4Q8WZA2 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
RAPGEF4Q8WZA2 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
RAPGEF4Q8WZA2 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC31.23■■■□□ 2.59
RAPGEF4Q8WZA2 CD72-202ENST00000378430 585 ntTSL 3 BASIC31.23■■■□□ 2.59
RAPGEF4Q8WZA2 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
RAPGEF4Q8WZA2 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
RAPGEF4Q8WZA2 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
RAPGEF4Q8WZA2 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
RAPGEF4Q8WZA2 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
RAPGEF4Q8WZA2 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
RAPGEF4Q8WZA2 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
RAPGEF4Q8WZA2 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
RAPGEF4Q8WZA2 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
RAPGEF4Q8WZA2 AC096631.2-201ENST00000436136 790 ntBASIC31.21■■■□□ 2.59
RAPGEF4Q8WZA2 QDPR-206ENST00000508623 601 ntTSL 3 BASIC31.21■■■□□ 2.59
RAPGEF4Q8WZA2 AL512631.2-201ENST00000604634 923 ntBASIC31.21■■■□□ 2.59
RAPGEF4Q8WZA2 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC31.21■■■□□ 2.59
RAPGEF4Q8WZA2 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC31.2■■■□□ 2.59
RAPGEF4Q8WZA2 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
RAPGEF4Q8WZA2 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC31.2■■■□□ 2.59
RAPGEF4Q8WZA2 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC31.2■■■□□ 2.59
RAPGEF4Q8WZA2 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
RAPGEF4Q8WZA2 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC31.19■■■□□ 2.58
RAPGEF4Q8WZA2 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
RAPGEF4Q8WZA2 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC31.19■■■□□ 2.58
RAPGEF4Q8WZA2 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
RAPGEF4Q8WZA2 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
RAPGEF4Q8WZA2 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC31.18■■■□□ 2.58
RAPGEF4Q8WZA2 SHF-206ENST00000560471 2499 ntTSL 5 BASIC31.18■■■□□ 2.58
RAPGEF4Q8WZA2 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
RAPGEF4Q8WZA2 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC31.17■■■□□ 2.58
RAPGEF4Q8WZA2 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms