Protein–RNA interactions for Protein: Q8TF05

PPP4R1, Serine/threonine-protein phosphatase 4 regulatory subunit 1, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1Q8TF05 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PPP4R1Q8TF05 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PPP4R1Q8TF05 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
PPP4R1Q8TF05 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC23.48■■□□□ 1.35
PPP4R1Q8TF05 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
PPP4R1Q8TF05 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PPP4R1Q8TF05 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PPP4R1Q8TF05 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
PPP4R1Q8TF05 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PPP4R1Q8TF05 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC23.47■■□□□ 1.35
PPP4R1Q8TF05 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PPP4R1Q8TF05 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PPP4R1Q8TF05 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC23.47■■□□□ 1.35
PPP4R1Q8TF05 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PPP4R1Q8TF05 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
PPP4R1Q8TF05 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
PPP4R1Q8TF05 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PPP4R1Q8TF05 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC23.46■■□□□ 1.35
PPP4R1Q8TF05 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC23.46■■□□□ 1.35
PPP4R1Q8TF05 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
PPP4R1Q8TF05 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC23.46■■□□□ 1.35
PPP4R1Q8TF05 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.35
PPP4R1Q8TF05 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PPP4R1Q8TF05 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.45■■□□□ 1.34
PPP4R1Q8TF05 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PPP4R1Q8TF05 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PPP4R1Q8TF05 AC097639.1-201ENST00000565519 1891 ntBASIC23.45■■□□□ 1.34
PPP4R1Q8TF05 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC23.44■■□□□ 1.34
PPP4R1Q8TF05 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.44■■□□□ 1.34
PPP4R1Q8TF05 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PPP4R1Q8TF05 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
PPP4R1Q8TF05 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
PPP4R1Q8TF05 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
PPP4R1Q8TF05 NTF6A-201ENST00000591175 560 ntBASIC23.43■■□□□ 1.34
PPP4R1Q8TF05 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
PPP4R1Q8TF05 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
PPP4R1Q8TF05 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC23.43■■□□□ 1.34
PPP4R1Q8TF05 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
PPP4R1Q8TF05 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
PPP4R1Q8TF05 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
PPP4R1Q8TF05 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.42■■□□□ 1.34
PPP4R1Q8TF05 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.42■■□□□ 1.34
PPP4R1Q8TF05 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
PPP4R1Q8TF05 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
PPP4R1Q8TF05 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
PPP4R1Q8TF05 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
PPP4R1Q8TF05 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
PPP4R1Q8TF05 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
PPP4R1Q8TF05 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PPP4R1Q8TF05 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
PPP4R1Q8TF05 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
PPP4R1Q8TF05 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
PPP4R1Q8TF05 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
PPP4R1Q8TF05 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
PPP4R1Q8TF05 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
PPP4R1Q8TF05 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
PPP4R1Q8TF05 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PPP4R1Q8TF05 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.4■■□□□ 1.34
PPP4R1Q8TF05 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
PPP4R1Q8TF05 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PPP4R1Q8TF05 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PPP4R1Q8TF05 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
PPP4R1Q8TF05 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
PPP4R1Q8TF05 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC23.4■■□□□ 1.34
PPP4R1Q8TF05 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
PPP4R1Q8TF05 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PPP4R1Q8TF05 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
PPP4R1Q8TF05 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.39■■□□□ 1.34
PPP4R1Q8TF05 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.39■■□□□ 1.33
PPP4R1Q8TF05 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
PPP4R1Q8TF05 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
PPP4R1Q8TF05 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
PPP4R1Q8TF05 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
PPP4R1Q8TF05 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.38■■□□□ 1.33
PPP4R1Q8TF05 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC23.38■■□□□ 1.33
PPP4R1Q8TF05 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PPP4R1Q8TF05 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
PPP4R1Q8TF05 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PPP4R1Q8TF05 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PPP4R1Q8TF05 AC060814.1-201ENST00000554326 538 ntBASIC23.38■■□□□ 1.33
PPP4R1Q8TF05 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
PPP4R1Q8TF05 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PPP4R1Q8TF05 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23.38■■□□□ 1.33
PPP4R1Q8TF05 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
PPP4R1Q8TF05 SLC6A10P-202ENST00000431994 2058 ntBASIC23.37■■□□□ 1.33
PPP4R1Q8TF05 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PPP4R1Q8TF05 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
PPP4R1Q8TF05 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
PPP4R1Q8TF05 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PPP4R1Q8TF05 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PPP4R1Q8TF05 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PPP4R1Q8TF05 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PPP4R1Q8TF05 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PPP4R1Q8TF05 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
PPP4R1Q8TF05 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
PPP4R1Q8TF05 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PPP4R1Q8TF05 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PPP4R1Q8TF05 LINC00543-201ENST00000567234 1845 ntBASIC23.36■■□□□ 1.33
PPP4R1Q8TF05 AC012354.3-201ENST00000623734 483 ntBASIC23.36■■□□□ 1.33
PPP4R1Q8TF05 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms