Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLDND2Q8NHS1 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLDND2Q8NHS1 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLDND2Q8NHS1 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.99■□□□□ 0.79
CLDND2Q8NHS1 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLDND2Q8NHS1 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLDND2Q8NHS1 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.99■□□□□ 0.79
CLDND2Q8NHS1 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CLDND2Q8NHS1 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CLDND2Q8NHS1 GUSBP5-201ENST00000418136 578 ntBASIC19.98■□□□□ 0.79
CLDND2Q8NHS1 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.98■□□□□ 0.79
CLDND2Q8NHS1 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLDND2Q8NHS1 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CLDND2Q8NHS1 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.98■□□□□ 0.79
CLDND2Q8NHS1 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLDND2Q8NHS1 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLDND2Q8NHS1 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.97■□□□□ 0.79
CLDND2Q8NHS1 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLDND2Q8NHS1 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CLDND2Q8NHS1 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLDND2Q8NHS1 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CLDND2Q8NHS1 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC19.96■□□□□ 0.79
CLDND2Q8NHS1 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLDND2Q8NHS1 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.96■□□□□ 0.79
CLDND2Q8NHS1 AC022616.5-201ENST00000518796 181 ntBASIC19.96■□□□□ 0.79
CLDND2Q8NHS1 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLDND2Q8NHS1 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CLDND2Q8NHS1 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CLDND2Q8NHS1 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CLDND2Q8NHS1 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.96■□□□□ 0.79
CLDND2Q8NHS1 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.95■□□□□ 0.78
CLDND2Q8NHS1 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.95■□□□□ 0.78
CLDND2Q8NHS1 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLDND2Q8NHS1 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.95■□□□□ 0.78
CLDND2Q8NHS1 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLDND2Q8NHS1 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLDND2Q8NHS1 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.95■□□□□ 0.78
CLDND2Q8NHS1 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLDND2Q8NHS1 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLDND2Q8NHS1 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLDND2Q8NHS1 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLDND2Q8NHS1 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CLDND2Q8NHS1 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CLDND2Q8NHS1 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLDND2Q8NHS1 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLDND2Q8NHS1 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLDND2Q8NHS1 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
CLDND2Q8NHS1 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLDND2Q8NHS1 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CLDND2Q8NHS1 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.94■□□□□ 0.78
CLDND2Q8NHS1 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.94■□□□□ 0.78
CLDND2Q8NHS1 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
CLDND2Q8NHS1 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.94■□□□□ 0.78
CLDND2Q8NHS1 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC19.94■□□□□ 0.78
CLDND2Q8NHS1 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.93■□□□□ 0.78
CLDND2Q8NHS1 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLDND2Q8NHS1 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.93■□□□□ 0.78
CLDND2Q8NHS1 AC239859.2-201ENST00000444165 318 ntBASIC19.93■□□□□ 0.78
CLDND2Q8NHS1 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLDND2Q8NHS1 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLDND2Q8NHS1 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLDND2Q8NHS1 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLDND2Q8NHS1 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.92■□□□□ 0.78
CLDND2Q8NHS1 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC19.92■□□□□ 0.78
CLDND2Q8NHS1 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.92■□□□□ 0.78
CLDND2Q8NHS1 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CLDND2Q8NHS1 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLDND2Q8NHS1 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLDND2Q8NHS1 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CLDND2Q8NHS1 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
CLDND2Q8NHS1 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLDND2Q8NHS1 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.91■□□□□ 0.78
CLDND2Q8NHS1 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.91■□□□□ 0.78
CLDND2Q8NHS1 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CLDND2Q8NHS1 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CLDND2Q8NHS1 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLDND2Q8NHS1 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDND2Q8NHS1 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDND2Q8NHS1 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLDND2Q8NHS1 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLDND2Q8NHS1 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.9■□□□□ 0.78
CLDND2Q8NHS1 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.9■□□□□ 0.78
CLDND2Q8NHS1 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDND2Q8NHS1 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDND2Q8NHS1 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDND2Q8NHS1 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLDND2Q8NHS1 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CLDND2Q8NHS1 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLDND2Q8NHS1 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLDND2Q8NHS1 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC19.89■□□□□ 0.77
CLDND2Q8NHS1 Z92544.1-202ENST00000571933 1220 ntBASIC19.89■□□□□ 0.77
CLDND2Q8NHS1 THA1P-201ENST00000590384 1145 ntBASIC19.89■□□□□ 0.77
CLDND2Q8NHS1 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.89■□□□□ 0.77
CLDND2Q8NHS1 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLDND2Q8NHS1 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CLDND2Q8NHS1 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CLDND2Q8NHS1 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CLDND2Q8NHS1 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLDND2Q8NHS1 KRT18P24-201ENST00000344739 1156 ntBASIC19.88■□□□□ 0.77
CLDND2Q8NHS1 AC131212.1-201ENST00000613771 668 ntBASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms