Protein–RNA interactions for Protein: Q8NE22

SETD9, SET domain-containing protein 9, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SETD9Q8NE22 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SETD9Q8NE22 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SETD9Q8NE22 CLDN5-201ENST00000403084 2357 ntBASIC21.59■■□□□ 1.05
SETD9Q8NE22 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SETD9Q8NE22 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.59■■□□□ 1.05
SETD9Q8NE22 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.59■■□□□ 1.05
SETD9Q8NE22 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SETD9Q8NE22 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.58■■□□□ 1.05
SETD9Q8NE22 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SETD9Q8NE22 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
SETD9Q8NE22 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
SETD9Q8NE22 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SETD9Q8NE22 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SETD9Q8NE22 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.57■■□□□ 1.04
SETD9Q8NE22 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SETD9Q8NE22 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SETD9Q8NE22 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SETD9Q8NE22 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SETD9Q8NE22 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SETD9Q8NE22 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.56■■□□□ 1.04
SETD9Q8NE22 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.56■■□□□ 1.04
SETD9Q8NE22 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SETD9Q8NE22 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SETD9Q8NE22 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.56■■□□□ 1.04
SETD9Q8NE22 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SETD9Q8NE22 AL359504.2-201ENST00000605506 1601 ntBASIC21.55■■□□□ 1.04
SETD9Q8NE22 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SETD9Q8NE22 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SETD9Q8NE22 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.55■■□□□ 1.04
SETD9Q8NE22 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.55■■□□□ 1.04
SETD9Q8NE22 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SETD9Q8NE22 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.55■■□□□ 1.04
SETD9Q8NE22 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SETD9Q8NE22 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
SETD9Q8NE22 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SETD9Q8NE22 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
SETD9Q8NE22 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.54■■□□□ 1.04
SETD9Q8NE22 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SETD9Q8NE22 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SETD9Q8NE22 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SETD9Q8NE22 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SETD9Q8NE22 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC21.53■■□□□ 1.04
SETD9Q8NE22 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC21.53■■□□□ 1.04
SETD9Q8NE22 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SETD9Q8NE22 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SETD9Q8NE22 ABCB10P4-201ENST00000566803 2184 ntBASIC21.53■■□□□ 1.04
SETD9Q8NE22 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.53■■□□□ 1.04
SETD9Q8NE22 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
SETD9Q8NE22 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SETD9Q8NE22 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.52■■□□□ 1.04
SETD9Q8NE22 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SETD9Q8NE22 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.52■■□□□ 1.04
SETD9Q8NE22 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
SETD9Q8NE22 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC21.52■■□□□ 1.04
SETD9Q8NE22 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SETD9Q8NE22 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
SETD9Q8NE22 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SETD9Q8NE22 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
SETD9Q8NE22 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
SETD9Q8NE22 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.51■■□□□ 1.03
SETD9Q8NE22 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
SETD9Q8NE22 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SETD9Q8NE22 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.51■■□□□ 1.03
SETD9Q8NE22 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.51■■□□□ 1.03
SETD9Q8NE22 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SETD9Q8NE22 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
SETD9Q8NE22 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.5■■□□□ 1.03
SETD9Q8NE22 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SETD9Q8NE22 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SETD9Q8NE22 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SETD9Q8NE22 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
SETD9Q8NE22 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.49■■□□□ 1.03
SETD9Q8NE22 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
SETD9Q8NE22 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SETD9Q8NE22 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SETD9Q8NE22 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
SETD9Q8NE22 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SETD9Q8NE22 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SETD9Q8NE22 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SETD9Q8NE22 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SETD9Q8NE22 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SETD9Q8NE22 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
SETD9Q8NE22 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
SETD9Q8NE22 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SETD9Q8NE22 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
SETD9Q8NE22 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
SETD9Q8NE22 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SETD9Q8NE22 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SETD9Q8NE22 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
SETD9Q8NE22 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21.48■■□□□ 1.03
SETD9Q8NE22 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SETD9Q8NE22 AL117328.2-201ENST00000624617 1940 ntBASIC21.48■■□□□ 1.03
SETD9Q8NE22 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.48■■□□□ 1.03
SETD9Q8NE22 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SETD9Q8NE22 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SETD9Q8NE22 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SETD9Q8NE22 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SETD9Q8NE22 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SETD9Q8NE22 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
SETD9Q8NE22 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 247.9 ms