Protein–RNA interactions for Protein: Q8NCN4

RNF169, E3 ubiquitin-protein ligase RNF169, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF169Q8NCN4 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC25.77■■□□□ 1.72
RNF169Q8NCN4 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC25.77■■□□□ 1.72
RNF169Q8NCN4 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
RNF169Q8NCN4 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC25.77■■□□□ 1.72
RNF169Q8NCN4 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC25.76■■□□□ 1.72
RNF169Q8NCN4 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC25.76■■□□□ 1.71
RNF169Q8NCN4 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC25.76■■□□□ 1.71
RNF169Q8NCN4 AL121749.1-202ENST00000609313 2153 ntBASIC25.76■■□□□ 1.71
RNF169Q8NCN4 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC25.76■■□□□ 1.71
RNF169Q8NCN4 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
RNF169Q8NCN4 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
RNF169Q8NCN4 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
RNF169Q8NCN4 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC25.75■■□□□ 1.71
RNF169Q8NCN4 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
RNF169Q8NCN4 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC25.74■■□□□ 1.71
RNF169Q8NCN4 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
RNF169Q8NCN4 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
RNF169Q8NCN4 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
RNF169Q8NCN4 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
RNF169Q8NCN4 GAK-223ENST00000628912 497 ntTSL 5 BASIC25.74■■□□□ 1.71
RNF169Q8NCN4 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
RNF169Q8NCN4 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
RNF169Q8NCN4 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RNF169Q8NCN4 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RNF169Q8NCN4 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
RNF169Q8NCN4 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC25.73■■□□□ 1.71
RNF169Q8NCN4 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC25.73■■□□□ 1.71
RNF169Q8NCN4 AC092028.1-203ENST00000608262 953 ntBASIC25.73■■□□□ 1.71
RNF169Q8NCN4 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC25.72■■□□□ 1.71
RNF169Q8NCN4 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
RNF169Q8NCN4 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
RNF169Q8NCN4 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
RNF169Q8NCN4 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
RNF169Q8NCN4 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
RNF169Q8NCN4 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
RNF169Q8NCN4 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC25.71■■□□□ 1.71
RNF169Q8NCN4 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
RNF169Q8NCN4 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
RNF169Q8NCN4 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC25.7■■□□□ 1.71
RNF169Q8NCN4 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
RNF169Q8NCN4 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
RNF169Q8NCN4 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC25.7■■□□□ 1.7
RNF169Q8NCN4 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.7
RNF169Q8NCN4 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC25.7■■□□□ 1.7
RNF169Q8NCN4 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RNF169Q8NCN4 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
RNF169Q8NCN4 ERN1-208ENST00000606895 2068 ntBASIC25.69■■□□□ 1.7
RNF169Q8NCN4 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC25.69■■□□□ 1.7
RNF169Q8NCN4 AC011551.1-201ENST00000614101 683 ntBASIC25.69■■□□□ 1.7
RNF169Q8NCN4 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
RNF169Q8NCN4 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RNF169Q8NCN4 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC25.68■■□□□ 1.7
RNF169Q8NCN4 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RNF169Q8NCN4 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
RNF169Q8NCN4 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RNF169Q8NCN4 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC25.68■■□□□ 1.7
RNF169Q8NCN4 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC25.68■■□□□ 1.7
RNF169Q8NCN4 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
RNF169Q8NCN4 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
RNF169Q8NCN4 AC019069.1-201ENST00000610008 1333 ntBASIC25.67■■□□□ 1.7
RNF169Q8NCN4 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
RNF169Q8NCN4 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
RNF169Q8NCN4 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
RNF169Q8NCN4 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
RNF169Q8NCN4 FOXO3B-201ENST00000395675 1928 ntBASIC25.67■■□□□ 1.7
RNF169Q8NCN4 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC25.66■■□□□ 1.7
RNF169Q8NCN4 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
RNF169Q8NCN4 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC25.65■■□□□ 1.7
RNF169Q8NCN4 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RNF169Q8NCN4 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RNF169Q8NCN4 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
RNF169Q8NCN4 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
RNF169Q8NCN4 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
RNF169Q8NCN4 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC25.64■■□□□ 1.7
RNF169Q8NCN4 TRIR-202ENST00000588213 841 ntTSL 3 BASIC25.64■■□□□ 1.7
RNF169Q8NCN4 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.69
RNF169Q8NCN4 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
RNF169Q8NCN4 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
RNF169Q8NCN4 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.69
RNF169Q8NCN4 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.69
RNF169Q8NCN4 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC25.63■■□□□ 1.69
RNF169Q8NCN4 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC25.63■■□□□ 1.69
RNF169Q8NCN4 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC25.63■■□□□ 1.69
RNF169Q8NCN4 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
RNF169Q8NCN4 PEMT-206ENST00000435340 960 ntTSL 5 BASIC25.63■■□□□ 1.69
RNF169Q8NCN4 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC25.63■■□□□ 1.69
RNF169Q8NCN4 MTDHP2-201ENST00000601468 714 ntBASIC25.63■■□□□ 1.69
RNF169Q8NCN4 AC010997.5-201ENST00000609182 354 ntBASIC25.63■■□□□ 1.69
RNF169Q8NCN4 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC25.63■■□□□ 1.69
RNF169Q8NCN4 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
RNF169Q8NCN4 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC25.63■■□□□ 1.69
RNF169Q8NCN4 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
RNF169Q8NCN4 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
RNF169Q8NCN4 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
RNF169Q8NCN4 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC25.62■■□□□ 1.69
RNF169Q8NCN4 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
RNF169Q8NCN4 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC25.61■■□□□ 1.69
RNF169Q8NCN4 SENP5-202ENST00000419026 973 ntTSL 3 BASIC25.61■■□□□ 1.69
RNF169Q8NCN4 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC25.61■■□□□ 1.69
RNF169Q8NCN4 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms