Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC71LQ8N9Z2 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC71LQ8N9Z2 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC71LQ8N9Z2 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CCDC71LQ8N9Z2 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC71LQ8N9Z2 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC19.55■□□□□ 0.72
CCDC71LQ8N9Z2 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC71LQ8N9Z2 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC71LQ8N9Z2 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC71LQ8N9Z2 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC71LQ8N9Z2 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC71LQ8N9Z2 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC19.54■□□□□ 0.72
CCDC71LQ8N9Z2 AC126177.7-201ENST00000547904 679 ntBASIC19.54■□□□□ 0.72
CCDC71LQ8N9Z2 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC71LQ8N9Z2 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC71LQ8N9Z2 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC71LQ8N9Z2 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC71LQ8N9Z2 AC068473.5-201ENST00000616428 2072 ntBASIC19.53■□□□□ 0.72
CCDC71LQ8N9Z2 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC71LQ8N9Z2 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC71LQ8N9Z2 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CCDC71LQ8N9Z2 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC71LQ8N9Z2 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
CCDC71LQ8N9Z2 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC71LQ8N9Z2 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC71LQ8N9Z2 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC71LQ8N9Z2 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.52■□□□□ 0.72
CCDC71LQ8N9Z2 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC71LQ8N9Z2 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC71LQ8N9Z2 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC71LQ8N9Z2 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC71LQ8N9Z2 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC71LQ8N9Z2 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC71LQ8N9Z2 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
CCDC71LQ8N9Z2 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
CCDC71LQ8N9Z2 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC71LQ8N9Z2 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CCDC71LQ8N9Z2 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC71LQ8N9Z2 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC71LQ8N9Z2 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CCDC71LQ8N9Z2 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC71LQ8N9Z2 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC71LQ8N9Z2 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC71LQ8N9Z2 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC71LQ8N9Z2 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC71LQ8N9Z2 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC71LQ8N9Z2 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC71LQ8N9Z2 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC71LQ8N9Z2 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC71LQ8N9Z2 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.5■□□□□ 0.71
CCDC71LQ8N9Z2 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC71LQ8N9Z2 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CCDC71LQ8N9Z2 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC71LQ8N9Z2 HGH1-207ENST00000628266 258 ntTSL 5 BASIC19.5■□□□□ 0.71
CCDC71LQ8N9Z2 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC71LQ8N9Z2 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
CCDC71LQ8N9Z2 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
CCDC71LQ8N9Z2 DUSP8P5-201ENST00000422884 1815 ntBASIC19.5■□□□□ 0.71
CCDC71LQ8N9Z2 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CCDC71LQ8N9Z2 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.49■□□□□ 0.71
CCDC71LQ8N9Z2 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC71LQ8N9Z2 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC19.49■□□□□ 0.71
CCDC71LQ8N9Z2 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC19.49■□□□□ 0.71
CCDC71LQ8N9Z2 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC71LQ8N9Z2 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC71LQ8N9Z2 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC71LQ8N9Z2 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC71LQ8N9Z2 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC71LQ8N9Z2 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.48■□□□□ 0.71
CCDC71LQ8N9Z2 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CCDC71LQ8N9Z2 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.48■□□□□ 0.71
CCDC71LQ8N9Z2 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC71LQ8N9Z2 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC71LQ8N9Z2 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.48■□□□□ 0.71
CCDC71LQ8N9Z2 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.48■□□□□ 0.71
CCDC71LQ8N9Z2 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC71LQ8N9Z2 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC71LQ8N9Z2 HLA-V-202ENST00000446817 847 ntBASIC19.47■□□□□ 0.71
CCDC71LQ8N9Z2 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC71LQ8N9Z2 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC71LQ8N9Z2 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CCDC71LQ8N9Z2 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.47■□□□□ 0.71
CCDC71LQ8N9Z2 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC71LQ8N9Z2 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC71LQ8N9Z2 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC19.46■□□□□ 0.71
CCDC71LQ8N9Z2 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC19.46■□□□□ 0.71
CCDC71LQ8N9Z2 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.46■□□□□ 0.71
CCDC71LQ8N9Z2 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.46■□□□□ 0.71
CCDC71LQ8N9Z2 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
CCDC71LQ8N9Z2 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CCDC71LQ8N9Z2 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CCDC71LQ8N9Z2 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC71LQ8N9Z2 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC71LQ8N9Z2 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC71LQ8N9Z2 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.45■□□□□ 0.7
CCDC71LQ8N9Z2 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC71LQ8N9Z2 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC71LQ8N9Z2 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC71LQ8N9Z2 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC71LQ8N9Z2 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms