Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
NPAS4Q8IUM7 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC25.65■■□□□ 1.7
NPAS4Q8IUM7 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
NPAS4Q8IUM7 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
NPAS4Q8IUM7 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
NPAS4Q8IUM7 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC25.64■■□□□ 1.7
NPAS4Q8IUM7 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
NPAS4Q8IUM7 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC25.63■■□□□ 1.69
NPAS4Q8IUM7 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
NPAS4Q8IUM7 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
NPAS4Q8IUM7 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
NPAS4Q8IUM7 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
NPAS4Q8IUM7 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
NPAS4Q8IUM7 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
NPAS4Q8IUM7 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC25.63■■□□□ 1.69
NPAS4Q8IUM7 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC25.63■■□□□ 1.69
NPAS4Q8IUM7 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC25.63■■□□□ 1.69
NPAS4Q8IUM7 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC25.63■■□□□ 1.69
NPAS4Q8IUM7 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
NPAS4Q8IUM7 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
NPAS4Q8IUM7 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
NPAS4Q8IUM7 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC25.63■■□□□ 1.69
NPAS4Q8IUM7 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
NPAS4Q8IUM7 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
NPAS4Q8IUM7 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
NPAS4Q8IUM7 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
NPAS4Q8IUM7 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
NPAS4Q8IUM7 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC25.62■■□□□ 1.69
NPAS4Q8IUM7 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
NPAS4Q8IUM7 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
NPAS4Q8IUM7 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC25.61■■□□□ 1.69
NPAS4Q8IUM7 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
NPAS4Q8IUM7 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC25.61■■□□□ 1.69
NPAS4Q8IUM7 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
NPAS4Q8IUM7 AF131216.4-201ENST00000638924 1588 ntBASIC25.61■■□□□ 1.69
NPAS4Q8IUM7 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC25.6■■□□□ 1.69
NPAS4Q8IUM7 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC25.6■■□□□ 1.69
NPAS4Q8IUM7 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC25.6■■□□□ 1.69
NPAS4Q8IUM7 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC25.6■■□□□ 1.69
NPAS4Q8IUM7 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC25.6■■□□□ 1.69
NPAS4Q8IUM7 CLTA-210ENST00000540080 989 ntTSL 2 BASIC25.6■■□□□ 1.69
NPAS4Q8IUM7 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
NPAS4Q8IUM7 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC25.59■■□□□ 1.69
NPAS4Q8IUM7 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC25.59■■□□□ 1.69
NPAS4Q8IUM7 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
NPAS4Q8IUM7 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
NPAS4Q8IUM7 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
NPAS4Q8IUM7 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
NPAS4Q8IUM7 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
NPAS4Q8IUM7 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC25.58■■□□□ 1.69
NPAS4Q8IUM7 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC25.58■■□□□ 1.69
NPAS4Q8IUM7 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC25.57■■□□□ 1.68
NPAS4Q8IUM7 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC25.57■■□□□ 1.68
NPAS4Q8IUM7 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC25.57■■□□□ 1.68
NPAS4Q8IUM7 FOXO3B-201ENST00000395675 1928 ntBASIC25.57■■□□□ 1.68
NPAS4Q8IUM7 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
NPAS4Q8IUM7 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC25.57■■□□□ 1.68
NPAS4Q8IUM7 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
NPAS4Q8IUM7 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
NPAS4Q8IUM7 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
NPAS4Q8IUM7 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
NPAS4Q8IUM7 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
NPAS4Q8IUM7 AK3-203ENST00000447596 705 ntTSL 2 BASIC25.56■■□□□ 1.68
NPAS4Q8IUM7 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC25.56■■□□□ 1.68
NPAS4Q8IUM7 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
NPAS4Q8IUM7 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC25.56■■□□□ 1.68
NPAS4Q8IUM7 MIR4466-201ENST00000606121 54 ntBASIC25.56■■□□□ 1.68
NPAS4Q8IUM7 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
NPAS4Q8IUM7 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC25.55■■□□□ 1.68
NPAS4Q8IUM7 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
NPAS4Q8IUM7 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC25.55■■□□□ 1.68
NPAS4Q8IUM7 AC110285.6-201ENST00000617652 491 ntBASIC25.55■■□□□ 1.68
NPAS4Q8IUM7 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
NPAS4Q8IUM7 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
NPAS4Q8IUM7 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
NPAS4Q8IUM7 CD72-202ENST00000378430 585 ntTSL 3 BASIC25.54■■□□□ 1.68
NPAS4Q8IUM7 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC25.54■■□□□ 1.68
NPAS4Q8IUM7 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
NPAS4Q8IUM7 SHF-206ENST00000560471 2499 ntTSL 5 BASIC25.54■■□□□ 1.68
NPAS4Q8IUM7 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC25.53■■□□□ 1.68
NPAS4Q8IUM7 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
NPAS4Q8IUM7 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
NPAS4Q8IUM7 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
NPAS4Q8IUM7 AL512631.2-201ENST00000604634 923 ntBASIC25.52■■□□□ 1.68
NPAS4Q8IUM7 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
NPAS4Q8IUM7 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
NPAS4Q8IUM7 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
NPAS4Q8IUM7 QDPR-206ENST00000508623 601 ntTSL 3 BASIC25.51■■□□□ 1.67
NPAS4Q8IUM7 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
NPAS4Q8IUM7 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
NPAS4Q8IUM7 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
NPAS4Q8IUM7 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
NPAS4Q8IUM7 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
NPAS4Q8IUM7 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
NPAS4Q8IUM7 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
NPAS4Q8IUM7 AC096631.2-201ENST00000436136 790 ntBASIC25.5■■□□□ 1.67
NPAS4Q8IUM7 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC25.5■■□□□ 1.67
NPAS4Q8IUM7 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC25.5■■□□□ 1.67
NPAS4Q8IUM7 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
NPAS4Q8IUM7 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms