Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 AC105265.2-201ENST00000467189 838 ntBASIC30.25■■■□□ 2.43
COL23A1Q86Y22 AC024257.2-201ENST00000549699 147 ntBASIC30.25■■■□□ 2.43
COL23A1Q86Y22 AL355001.2-201ENST00000620617 1191 ntBASIC30.25■■■□□ 2.43
COL23A1Q86Y22 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
COL23A1Q86Y22 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
COL23A1Q86Y22 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
COL23A1Q86Y22 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC30.24■■■□□ 2.43
COL23A1Q86Y22 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
COL23A1Q86Y22 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC30.24■■■□□ 2.43
COL23A1Q86Y22 PARL-206ENST00000435888 1098 ntTSL 5 BASIC30.24■■■□□ 2.43
COL23A1Q86Y22 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC30.24■■■□□ 2.43
COL23A1Q86Y22 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC30.24■■■□□ 2.43
COL23A1Q86Y22 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC30.24■■■□□ 2.43
COL23A1Q86Y22 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC30.23■■■□□ 2.43
COL23A1Q86Y22 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC30.23■■■□□ 2.43
COL23A1Q86Y22 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
COL23A1Q86Y22 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
COL23A1Q86Y22 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC30.22■■■□□ 2.43
COL23A1Q86Y22 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
COL23A1Q86Y22 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC30.22■■■□□ 2.43
COL23A1Q86Y22 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC30.22■■■□□ 2.43
COL23A1Q86Y22 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
COL23A1Q86Y22 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
COL23A1Q86Y22 AL136967.2-201ENST00000623968 743 ntBASIC30.21■■■□□ 2.43
COL23A1Q86Y22 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC30.21■■■□□ 2.43
COL23A1Q86Y22 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
COL23A1Q86Y22 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC30.2■■■□□ 2.43
COL23A1Q86Y22 MIR6821-201ENST00000617625 74 ntBASIC30.2■■■□□ 2.43
COL23A1Q86Y22 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
COL23A1Q86Y22 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC30.19■■■□□ 2.42
COL23A1Q86Y22 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
COL23A1Q86Y22 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
COL23A1Q86Y22 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC30.18■■■□□ 2.42
COL23A1Q86Y22 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC30.18■■■□□ 2.42
COL23A1Q86Y22 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC30.18■■■□□ 2.42
COL23A1Q86Y22 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC30.18■■■□□ 2.42
COL23A1Q86Y22 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC30.18■■■□□ 2.42
COL23A1Q86Y22 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
COL23A1Q86Y22 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
COL23A1Q86Y22 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC30.17■■■□□ 2.42
COL23A1Q86Y22 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
COL23A1Q86Y22 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
COL23A1Q86Y22 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC30.16■■■□□ 2.42
COL23A1Q86Y22 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
COL23A1Q86Y22 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
COL23A1Q86Y22 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
COL23A1Q86Y22 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC30.15■■■□□ 2.42
COL23A1Q86Y22 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC30.14■■■□□ 2.42
COL23A1Q86Y22 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC30.14■■■□□ 2.42
COL23A1Q86Y22 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC30.14■■■□□ 2.42
COL23A1Q86Y22 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC30.14■■■□□ 2.42
COL23A1Q86Y22 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
COL23A1Q86Y22 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC30.14■■■□□ 2.42
COL23A1Q86Y22 AF213884.3-201ENST00000563833 479 ntBASIC30.14■■■□□ 2.42
COL23A1Q86Y22 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC30.14■■■□□ 2.42
COL23A1Q86Y22 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC30.13■■■□□ 2.41
COL23A1Q86Y22 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
COL23A1Q86Y22 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC30.13■■■□□ 2.41
COL23A1Q86Y22 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
COL23A1Q86Y22 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
COL23A1Q86Y22 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
COL23A1Q86Y22 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC30.12■■■□□ 2.41
COL23A1Q86Y22 AC097381.1-201ENST00000429019 1296 ntBASIC30.12■■■□□ 2.41
COL23A1Q86Y22 RBM38-205ENST00000440234 686 ntTSL 2 BASIC30.12■■■□□ 2.41
COL23A1Q86Y22 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC30.12■■■□□ 2.41
COL23A1Q86Y22 STOX2-205ENST00000513034 807 ntTSL 3 BASIC30.12■■■□□ 2.41
COL23A1Q86Y22 SNX5-217ENST00000606557 1087 ntBASIC30.12■■■□□ 2.41
COL23A1Q86Y22 AC087623.3-201ENST00000607047 1098 ntBASIC30.12■■■□□ 2.41
COL23A1Q86Y22 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC30.11■■■□□ 2.41
COL23A1Q86Y22 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC30.11■■■□□ 2.41
COL23A1Q86Y22 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
COL23A1Q86Y22 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC30.11■■■□□ 2.41
COL23A1Q86Y22 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC30.11■■■□□ 2.41
COL23A1Q86Y22 AL162430.1-201ENST00000480705 870 ntBASIC30.11■■■□□ 2.41
COL23A1Q86Y22 MIR6722-201ENST00000617286 78 ntBASIC30.11■■■□□ 2.41
COL23A1Q86Y22 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC30.11■■■□□ 2.41
COL23A1Q86Y22 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
COL23A1Q86Y22 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
COL23A1Q86Y22 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC30.1■■■□□ 2.41
COL23A1Q86Y22 GRAMD4P4-201ENST00000613563 1115 ntBASIC30.1■■■□□ 2.41
COL23A1Q86Y22 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC30.1■■■□□ 2.41
COL23A1Q86Y22 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
COL23A1Q86Y22 MIR939-201ENST00000401314 82 ntBASIC30.09■■■□□ 2.41
COL23A1Q86Y22 SRD5A1P1-201ENST00000442297 786 ntBASIC30.09■■■□□ 2.41
COL23A1Q86Y22 SSSCA1-AS1-201ENST00000567594 614 ntBASIC30.09■■■□□ 2.41
COL23A1Q86Y22 AC142472.1-201ENST00000612013 1741 ntBASIC30.09■■■□□ 2.41
COL23A1Q86Y22 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
COL23A1Q86Y22 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC30.08■■■□□ 2.41
COL23A1Q86Y22 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC30.08■■■□□ 2.41
COL23A1Q86Y22 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC30.08■■■□□ 2.41
COL23A1Q86Y22 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC30.08■■■□□ 2.41
COL23A1Q86Y22 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
COL23A1Q86Y22 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
COL23A1Q86Y22 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC30.07■■■□□ 2.4
COL23A1Q86Y22 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC30.07■■■□□ 2.4
COL23A1Q86Y22 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC30.07■■■□□ 2.4
COL23A1Q86Y22 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
COL23A1Q86Y22 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
COL23A1Q86Y22 GLI3-203ENST00000437480 451 ntTSL 2 BASIC30.06■■■□□ 2.4
COL23A1Q86Y22 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms