Protein–RNA interactions for Protein: Q86VN1

VPS36, Vacuolar protein-sorting-associated protein 36, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36Q86VN1 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
VPS36Q86VN1 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC25.31■■□□□ 1.64
VPS36Q86VN1 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
VPS36Q86VN1 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC25.31■■□□□ 1.64
VPS36Q86VN1 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
VPS36Q86VN1 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
VPS36Q86VN1 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
VPS36Q86VN1 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
VPS36Q86VN1 HES4-202ENST00000428771 1040 ntTSL 2 BASIC25.3■■□□□ 1.64
VPS36Q86VN1 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
VPS36Q86VN1 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
VPS36Q86VN1 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
VPS36Q86VN1 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
VPS36Q86VN1 AC007029.1-201ENST00000604183 313 ntBASIC25.29■■□□□ 1.64
VPS36Q86VN1 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC25.29■■□□□ 1.64
VPS36Q86VN1 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC25.29■■□□□ 1.64
VPS36Q86VN1 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
VPS36Q86VN1 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
VPS36Q86VN1 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
VPS36Q86VN1 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
VPS36Q86VN1 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
VPS36Q86VN1 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC25.28■■□□□ 1.64
VPS36Q86VN1 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC25.28■■□□□ 1.64
VPS36Q86VN1 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
VPS36Q86VN1 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
VPS36Q86VN1 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC25.28■■□□□ 1.64
VPS36Q86VN1 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
VPS36Q86VN1 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
VPS36Q86VN1 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
VPS36Q86VN1 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
VPS36Q86VN1 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC25.27■■□□□ 1.64
VPS36Q86VN1 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
VPS36Q86VN1 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
VPS36Q86VN1 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
VPS36Q86VN1 KRT18P10-201ENST00000388836 1287 ntBASIC25.27■■□□□ 1.64
VPS36Q86VN1 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC25.27■■□□□ 1.64
VPS36Q86VN1 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC25.27■■□□□ 1.64
VPS36Q86VN1 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
VPS36Q86VN1 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
VPS36Q86VN1 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
VPS36Q86VN1 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
VPS36Q86VN1 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
VPS36Q86VN1 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
VPS36Q86VN1 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
VPS36Q86VN1 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
VPS36Q86VN1 GFER-205ENST00000569451 517 ntTSL 5 BASIC25.26■■□□□ 1.63
VPS36Q86VN1 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC25.26■■□□□ 1.63
VPS36Q86VN1 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
VPS36Q86VN1 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
VPS36Q86VN1 GPX1-201ENST00000419349 1106 ntBASIC25.25■■□□□ 1.63
VPS36Q86VN1 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
VPS36Q86VN1 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC25.25■■□□□ 1.63
VPS36Q86VN1 LINC00543-201ENST00000567234 1845 ntBASIC25.24■■□□□ 1.63
VPS36Q86VN1 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC25.24■■□□□ 1.63
VPS36Q86VN1 AC141586.4-201ENST00000624558 1573 ntBASIC25.24■■□□□ 1.63
VPS36Q86VN1 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
VPS36Q86VN1 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
VPS36Q86VN1 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
VPS36Q86VN1 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
VPS36Q86VN1 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC25.23■■□□□ 1.63
VPS36Q86VN1 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
VPS36Q86VN1 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC25.23■■□□□ 1.63
VPS36Q86VN1 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC25.23■■□□□ 1.63
VPS36Q86VN1 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC25.23■■□□□ 1.63
VPS36Q86VN1 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
VPS36Q86VN1 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC25.22■■□□□ 1.63
VPS36Q86VN1 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
VPS36Q86VN1 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC25.22■■□□□ 1.63
VPS36Q86VN1 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
VPS36Q86VN1 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
VPS36Q86VN1 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
VPS36Q86VN1 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
VPS36Q86VN1 MIR6089-201ENST00000616698 64 ntBASIC25.22■■□□□ 1.63
VPS36Q86VN1 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
VPS36Q86VN1 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
VPS36Q86VN1 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
VPS36Q86VN1 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
VPS36Q86VN1 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
VPS36Q86VN1 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
VPS36Q86VN1 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
VPS36Q86VN1 TMEM202-AS1-202ENST00000565181 2325 ntBASIC25.2■■□□□ 1.63
VPS36Q86VN1 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC25.2■■□□□ 1.62
VPS36Q86VN1 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC25.2■■□□□ 1.62
VPS36Q86VN1 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
VPS36Q86VN1 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC25.2■■□□□ 1.62
VPS36Q86VN1 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
VPS36Q86VN1 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
VPS36Q86VN1 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
VPS36Q86VN1 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
VPS36Q86VN1 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
VPS36Q86VN1 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC25.19■■□□□ 1.62
VPS36Q86VN1 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
VPS36Q86VN1 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
VPS36Q86VN1 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
VPS36Q86VN1 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC25.18■■□□□ 1.62
VPS36Q86VN1 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
VPS36Q86VN1 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC25.18■■□□□ 1.62
VPS36Q86VN1 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC25.18■■□□□ 1.62
VPS36Q86VN1 RAP2CP1-202ENST00000605179 643 ntBASIC25.18■■□□□ 1.62
VPS36Q86VN1 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms