Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
LRRTM4Q86VH4 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
LRRTM4Q86VH4 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
LRRTM4Q86VH4 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
LRRTM4Q86VH4 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
LRRTM4Q86VH4 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
LRRTM4Q86VH4 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
LRRTM4Q86VH4 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
LRRTM4Q86VH4 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC23.24■■□□□ 1.31
LRRTM4Q86VH4 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC23.23■■□□□ 1.31
LRRTM4Q86VH4 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
LRRTM4Q86VH4 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC23.23■■□□□ 1.31
LRRTM4Q86VH4 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
LRRTM4Q86VH4 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
LRRTM4Q86VH4 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.23■■□□□ 1.31
LRRTM4Q86VH4 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC23.23■■□□□ 1.31
LRRTM4Q86VH4 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC23.23■■□□□ 1.31
LRRTM4Q86VH4 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
LRRTM4Q86VH4 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
LRRTM4Q86VH4 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
LRRTM4Q86VH4 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
LRRTM4Q86VH4 KRT18P24-201ENST00000344739 1156 ntBASIC23.22■■□□□ 1.31
LRRTM4Q86VH4 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC23.22■■□□□ 1.31
LRRTM4Q86VH4 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
LRRTM4Q86VH4 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
LRRTM4Q86VH4 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC23.21■■□□□ 1.31
LRRTM4Q86VH4 THA1P-201ENST00000590384 1145 ntBASIC23.21■■□□□ 1.31
LRRTM4Q86VH4 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
LRRTM4Q86VH4 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
LRRTM4Q86VH4 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
LRRTM4Q86VH4 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
LRRTM4Q86VH4 AC120024.1-201ENST00000562672 995 ntBASIC23.2■■□□□ 1.3
LRRTM4Q86VH4 TK2-216ENST00000564917 1156 ntTSL 3 BASIC23.2■■□□□ 1.3
LRRTM4Q86VH4 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
LRRTM4Q86VH4 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
LRRTM4Q86VH4 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
LRRTM4Q86VH4 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
LRRTM4Q86VH4 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.19■■□□□ 1.3
LRRTM4Q86VH4 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
LRRTM4Q86VH4 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.19■■□□□ 1.3
LRRTM4Q86VH4 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
LRRTM4Q86VH4 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
LRRTM4Q86VH4 PRTG-204ENST00000561292 833 ntTSL 3 BASIC23.18■■□□□ 1.3
LRRTM4Q86VH4 SSSCA1-AS1-201ENST00000567594 614 ntBASIC23.18■■□□□ 1.3
LRRTM4Q86VH4 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC23.18■■□□□ 1.3
LRRTM4Q86VH4 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
LRRTM4Q86VH4 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
LRRTM4Q86VH4 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.18■■□□□ 1.3
LRRTM4Q86VH4 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
LRRTM4Q86VH4 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.17■■□□□ 1.3
LRRTM4Q86VH4 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
LRRTM4Q86VH4 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC23.17■■□□□ 1.3
LRRTM4Q86VH4 AC009299.2-201ENST00000482477 511 ntBASIC23.17■■□□□ 1.3
LRRTM4Q86VH4 AC011551.1-201ENST00000614101 683 ntBASIC23.17■■□□□ 1.3
LRRTM4Q86VH4 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
LRRTM4Q86VH4 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
LRRTM4Q86VH4 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC23.16■■□□□ 1.3
LRRTM4Q86VH4 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
LRRTM4Q86VH4 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC23.16■■□□□ 1.3
LRRTM4Q86VH4 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
LRRTM4Q86VH4 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
LRRTM4Q86VH4 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC23.16■■□□□ 1.3
LRRTM4Q86VH4 AL035685.1-201ENST00000636663 812 ntBASIC23.16■■□□□ 1.3
LRRTM4Q86VH4 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
LRRTM4Q86VH4 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
LRRTM4Q86VH4 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
LRRTM4Q86VH4 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
LRRTM4Q86VH4 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
LRRTM4Q86VH4 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
LRRTM4Q86VH4 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.14■■□□□ 1.29
LRRTM4Q86VH4 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC23.14■■□□□ 1.29
LRRTM4Q86VH4 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC23.13■■□□□ 1.29
LRRTM4Q86VH4 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
LRRTM4Q86VH4 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC23.13■■□□□ 1.29
LRRTM4Q86VH4 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
LRRTM4Q86VH4 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC23.13■■□□□ 1.29
LRRTM4Q86VH4 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
LRRTM4Q86VH4 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
LRRTM4Q86VH4 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
LRRTM4Q86VH4 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
LRRTM4Q86VH4 SLC6A10P-202ENST00000431994 2058 ntBASIC23.12■■□□□ 1.29
LRRTM4Q86VH4 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
LRRTM4Q86VH4 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
LRRTM4Q86VH4 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC23.11■■□□□ 1.29
LRRTM4Q86VH4 GAK-223ENST00000628912 497 ntTSL 5 BASIC23.11■■□□□ 1.29
LRRTM4Q86VH4 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
LRRTM4Q86VH4 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.11■■□□□ 1.29
LRRTM4Q86VH4 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC23.11■■□□□ 1.29
LRRTM4Q86VH4 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
LRRTM4Q86VH4 RNF146-205ENST00000477776 762 ntTSL 3 BASIC23.1■■□□□ 1.29
LRRTM4Q86VH4 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
LRRTM4Q86VH4 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
LRRTM4Q86VH4 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.09■■□□□ 1.29
LRRTM4Q86VH4 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
LRRTM4Q86VH4 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC23.09■■□□□ 1.29
LRRTM4Q86VH4 AC090877.2-201ENST00000558441 1738 ntBASIC23.09■■□□□ 1.29
LRRTM4Q86VH4 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
LRRTM4Q86VH4 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
LRRTM4Q86VH4 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.09■■□□□ 1.29
LRRTM4Q86VH4 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms