Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
VPS13BQ7Z7G8 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VPS13BQ7Z7G8 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS13BQ7Z7G8 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VPS13BQ7Z7G8 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC14.81□□□□□ -0.04
VPS13BQ7Z7G8 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VPS13BQ7Z7G8 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC14.81□□□□□ -0.04
VPS13BQ7Z7G8 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC14.81□□□□□ -0.04
VPS13BQ7Z7G8 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC14.81□□□□□ -0.04
VPS13BQ7Z7G8 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC14.81□□□□□ -0.04
VPS13BQ7Z7G8 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
VPS13BQ7Z7G8 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC14.81□□□□□ -0.04
VPS13BQ7Z7G8 AC087623.3-201ENST00000607047 1098 ntBASIC14.81□□□□□ -0.04
VPS13BQ7Z7G8 UNC93B3-201ENST00000308076 687 ntBASIC14.8□□□□□ -0.04
VPS13BQ7Z7G8 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VPS13BQ7Z7G8 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VPS13BQ7Z7G8 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC14.8□□□□□ -0.04
VPS13BQ7Z7G8 AL355001.2-201ENST00000620617 1191 ntBASIC14.8□□□□□ -0.04
VPS13BQ7Z7G8 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
VPS13BQ7Z7G8 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC14.8□□□□□ -0.04
VPS13BQ7Z7G8 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VPS13BQ7Z7G8 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VPS13BQ7Z7G8 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VPS13BQ7Z7G8 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC14.8□□□□□ -0.04
VPS13BQ7Z7G8 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
VPS13BQ7Z7G8 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VPS13BQ7Z7G8 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VPS13BQ7Z7G8 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VPS13BQ7Z7G8 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
VPS13BQ7Z7G8 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC14.79□□□□□ -0.04
VPS13BQ7Z7G8 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VPS13BQ7Z7G8 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
VPS13BQ7Z7G8 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VPS13BQ7Z7G8 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VPS13BQ7Z7G8 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VPS13BQ7Z7G8 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VPS13BQ7Z7G8 AC142381.2-201ENST00000566120 298 ntBASIC14.78□□□□□ -0.04
VPS13BQ7Z7G8 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VPS13BQ7Z7G8 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
VPS13BQ7Z7G8 MTDHP2-201ENST00000601468 714 ntBASIC14.78□□□□□ -0.04
VPS13BQ7Z7G8 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC14.78□□□□□ -0.04
VPS13BQ7Z7G8 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VPS13BQ7Z7G8 AL356740.2-201ENST00000601559 647 ntBASIC14.77□□□□□ -0.04
VPS13BQ7Z7G8 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
VPS13BQ7Z7G8 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
VPS13BQ7Z7G8 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
VPS13BQ7Z7G8 AF131216.4-201ENST00000638924 1588 ntBASIC14.77□□□□□ -0.04
VPS13BQ7Z7G8 SHF-206ENST00000560471 2499 ntTSL 5 BASIC14.77□□□□□ -0.04
VPS13BQ7Z7G8 AC090192.1-201ENST00000517740 490 ntBASIC14.77□□□□□ -0.04
VPS13BQ7Z7G8 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC14.77□□□□□ -0.04
VPS13BQ7Z7G8 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
VPS13BQ7Z7G8 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
VPS13BQ7Z7G8 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
VPS13BQ7Z7G8 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
VPS13BQ7Z7G8 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
VPS13BQ7Z7G8 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC14.76□□□□□ -0.05
VPS13BQ7Z7G8 AC011551.1-201ENST00000614101 683 ntBASIC14.76□□□□□ -0.05
VPS13BQ7Z7G8 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC14.76□□□□□ -0.05
VPS13BQ7Z7G8 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC14.76□□□□□ -0.05
VPS13BQ7Z7G8 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS13BQ7Z7G8 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS13BQ7Z7G8 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS13BQ7Z7G8 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC14.76□□□□□ -0.05
VPS13BQ7Z7G8 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS13BQ7Z7G8 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
VPS13BQ7Z7G8 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS13BQ7Z7G8 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS13BQ7Z7G8 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
VPS13BQ7Z7G8 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
VPS13BQ7Z7G8 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
VPS13BQ7Z7G8 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC14.75□□□□□ -0.05
VPS13BQ7Z7G8 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
VPS13BQ7Z7G8 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
VPS13BQ7Z7G8 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VPS13BQ7Z7G8 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC14.75□□□□□ -0.05
VPS13BQ7Z7G8 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
VPS13BQ7Z7G8 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
VPS13BQ7Z7G8 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC14.75□□□□□ -0.05
VPS13BQ7Z7G8 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC14.75□□□□□ -0.05
VPS13BQ7Z7G8 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
VPS13BQ7Z7G8 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPS13BQ7Z7G8 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPS13BQ7Z7G8 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPS13BQ7Z7G8 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPS13BQ7Z7G8 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPS13BQ7Z7G8 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC14.74□□□□□ -0.05
VPS13BQ7Z7G8 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPS13BQ7Z7G8 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC14.74□□□□□ -0.05
VPS13BQ7Z7G8 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
VPS13BQ7Z7G8 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPS13BQ7Z7G8 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPS13BQ7Z7G8 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPS13BQ7Z7G8 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
VPS13BQ7Z7G8 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPS13BQ7Z7G8 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VPS13BQ7Z7G8 AC105265.2-201ENST00000467189 838 ntBASIC14.73□□□□□ -0.05
VPS13BQ7Z7G8 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VPS13BQ7Z7G8 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VPS13BQ7Z7G8 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC14.73□□□□□ -0.05
VPS13BQ7Z7G8 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms