Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CSMD2Q7Z408 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CSMD2Q7Z408 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CSMD2Q7Z408 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CSMD2Q7Z408 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CSMD2Q7Z408 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CSMD2Q7Z408 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CSMD2Q7Z408 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CSMD2Q7Z408 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.29■□□□□ 0.84
CSMD2Q7Z408 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
CSMD2Q7Z408 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.28■□□□□ 0.84
CSMD2Q7Z408 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CSMD2Q7Z408 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CSMD2Q7Z408 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CSMD2Q7Z408 AC011551.1-201ENST00000614101 683 ntBASIC20.28■□□□□ 0.84
CSMD2Q7Z408 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CSMD2Q7Z408 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.28■□□□□ 0.84
CSMD2Q7Z408 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CSMD2Q7Z408 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CSMD2Q7Z408 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CSMD2Q7Z408 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
CSMD2Q7Z408 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CSMD2Q7Z408 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CSMD2Q7Z408 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
CSMD2Q7Z408 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.26■□□□□ 0.83
CSMD2Q7Z408 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CSMD2Q7Z408 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.26■□□□□ 0.83
CSMD2Q7Z408 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CSMD2Q7Z408 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.25■□□□□ 0.83
CSMD2Q7Z408 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CSMD2Q7Z408 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
CSMD2Q7Z408 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CSMD2Q7Z408 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.25■□□□□ 0.83
CSMD2Q7Z408 IKBKGP1-201ENST00000612193 1073 ntBASIC20.25■□□□□ 0.83
CSMD2Q7Z408 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CSMD2Q7Z408 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSMD2Q7Z408 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.24■□□□□ 0.83
CSMD2Q7Z408 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.24■□□□□ 0.83
CSMD2Q7Z408 AL136162.1-201ENST00000607711 1078 ntBASIC20.24■□□□□ 0.83
CSMD2Q7Z408 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSMD2Q7Z408 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CSMD2Q7Z408 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CSMD2Q7Z408 AC091305.1-201ENST00000479476 895 ntBASIC20.23■□□□□ 0.83
CSMD2Q7Z408 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.23■□□□□ 0.83
CSMD2Q7Z408 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CSMD2Q7Z408 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.23■□□□□ 0.83
CSMD2Q7Z408 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CSMD2Q7Z408 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.23■□□□□ 0.83
CSMD2Q7Z408 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.23■□□□□ 0.83
CSMD2Q7Z408 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CSMD2Q7Z408 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CSMD2Q7Z408 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CSMD2Q7Z408 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CSMD2Q7Z408 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.22■□□□□ 0.83
CSMD2Q7Z408 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.22■□□□□ 0.83
CSMD2Q7Z408 AC092437.1-201ENST00000624794 1048 ntBASIC20.22■□□□□ 0.83
CSMD2Q7Z408 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CSMD2Q7Z408 AF213884.3-201ENST00000563833 479 ntBASIC20.22■□□□□ 0.83
CSMD2Q7Z408 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CSMD2Q7Z408 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC20.21■□□□□ 0.83
CSMD2Q7Z408 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CSMD2Q7Z408 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CSMD2Q7Z408 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CSMD2Q7Z408 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CSMD2Q7Z408 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CSMD2Q7Z408 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.2■□□□□ 0.82
CSMD2Q7Z408 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CSMD2Q7Z408 ESRRAP2-201ENST00000418437 1549 ntBASIC20.2■□□□□ 0.82
CSMD2Q7Z408 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.19■□□□□ 0.82
CSMD2Q7Z408 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.19■□□□□ 0.82
CSMD2Q7Z408 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.19■□□□□ 0.82
CSMD2Q7Z408 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSMD2Q7Z408 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CSMD2Q7Z408 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.18■□□□□ 0.82
CSMD2Q7Z408 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CSMD2Q7Z408 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.18■□□□□ 0.82
CSMD2Q7Z408 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.18■□□□□ 0.82
CSMD2Q7Z408 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CSMD2Q7Z408 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CSMD2Q7Z408 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.17■□□□□ 0.82
CSMD2Q7Z408 AC022517.1-201ENST00000592429 346 ntBASIC20.17■□□□□ 0.82
CSMD2Q7Z408 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.17■□□□□ 0.82
CSMD2Q7Z408 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.17■□□□□ 0.82
CSMD2Q7Z408 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.17■□□□□ 0.82
CSMD2Q7Z408 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
CSMD2Q7Z408 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CSMD2Q7Z408 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CSMD2Q7Z408 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.17■□□□□ 0.82
CSMD2Q7Z408 RASA4CP-201ENST00000424092 1398 ntBASIC20.16■□□□□ 0.82
CSMD2Q7Z408 ID1-201ENST00000376105 1233 ntBASIC20.16■□□□□ 0.82
CSMD2Q7Z408 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.16■□□□□ 0.82
CSMD2Q7Z408 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CSMD2Q7Z408 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CSMD2Q7Z408 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.16■□□□□ 0.82
CSMD2Q7Z408 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CSMD2Q7Z408 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.15■□□□□ 0.82
CSMD2Q7Z408 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
CSMD2Q7Z408 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.15■□□□□ 0.82
CSMD2Q7Z408 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CSMD2Q7Z408 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms