Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC29.78■■■□□ 2.36
PRPF40BQ6NWY9 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC29.78■■■□□ 2.36
PRPF40BQ6NWY9 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC29.78■■■□□ 2.36
PRPF40BQ6NWY9 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC29.78■■■□□ 2.36
PRPF40BQ6NWY9 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC29.77■■■□□ 2.36
PRPF40BQ6NWY9 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC29.77■■■□□ 2.36
PRPF40BQ6NWY9 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC29.77■■■□□ 2.36
PRPF40BQ6NWY9 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC29.76■■■□□ 2.35
PRPF40BQ6NWY9 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC29.76■■■□□ 2.35
PRPF40BQ6NWY9 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC29.76■■■□□ 2.35
PRPF40BQ6NWY9 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
PRPF40BQ6NWY9 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
PRPF40BQ6NWY9 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC29.75■■■□□ 2.35
PRPF40BQ6NWY9 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC29.75■■■□□ 2.35
PRPF40BQ6NWY9 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC29.75■■■□□ 2.35
PRPF40BQ6NWY9 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC29.75■■■□□ 2.35
PRPF40BQ6NWY9 MIR3621-201ENST00000580529 85 ntBASIC29.75■■■□□ 2.35
PRPF40BQ6NWY9 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
PRPF40BQ6NWY9 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC29.75■■■□□ 2.35
PRPF40BQ6NWY9 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC29.75■■■□□ 2.35
PRPF40BQ6NWY9 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
PRPF40BQ6NWY9 AC010997.5-201ENST00000609182 354 ntBASIC29.74■■■□□ 2.35
PRPF40BQ6NWY9 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC29.73■■■□□ 2.35
PRPF40BQ6NWY9 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
PRPF40BQ6NWY9 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC29.73■■■□□ 2.35
PRPF40BQ6NWY9 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC29.73■■■□□ 2.35
PRPF40BQ6NWY9 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
PRPF40BQ6NWY9 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
PRPF40BQ6NWY9 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC29.72■■■□□ 2.35
PRPF40BQ6NWY9 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
PRPF40BQ6NWY9 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC29.72■■■□□ 2.35
PRPF40BQ6NWY9 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC29.72■■■□□ 2.35
PRPF40BQ6NWY9 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC29.71■■■□□ 2.35
PRPF40BQ6NWY9 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC29.71■■■□□ 2.35
PRPF40BQ6NWY9 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
PRPF40BQ6NWY9 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
PRPF40BQ6NWY9 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC29.7■■■□□ 2.35
PRPF40BQ6NWY9 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC29.7■■■□□ 2.35
PRPF40BQ6NWY9 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC29.7■■■□□ 2.35
PRPF40BQ6NWY9 AC005837.3-201ENST00000612163 286 ntBASIC29.7■■■□□ 2.35
PRPF40BQ6NWY9 MIR6724-1-201ENST00000616420 92 ntBASIC29.7■■■□□ 2.35
PRPF40BQ6NWY9 MIR6724-2-201ENST00000616483 92 ntBASIC29.7■■■□□ 2.35
PRPF40BQ6NWY9 MIR6724-4-201ENST00000617390 92 ntBASIC29.7■■■□□ 2.35
PRPF40BQ6NWY9 MIR6724-3-201ENST00000622482 92 ntBASIC29.7■■■□□ 2.35
PRPF40BQ6NWY9 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC29.7■■■□□ 2.34
PRPF40BQ6NWY9 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC29.7■■■□□ 2.34
PRPF40BQ6NWY9 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
PRPF40BQ6NWY9 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC29.69■■■□□ 2.34
PRPF40BQ6NWY9 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC29.69■■■□□ 2.34
PRPF40BQ6NWY9 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
PRPF40BQ6NWY9 LSM4-201ENST00000252816 986 ntTSL 2 BASIC29.69■■■□□ 2.34
PRPF40BQ6NWY9 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC29.69■■■□□ 2.34
PRPF40BQ6NWY9 AC096631.2-201ENST00000436136 790 ntBASIC29.69■■■□□ 2.34
PRPF40BQ6NWY9 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC29.69■■■□□ 2.34
PRPF40BQ6NWY9 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC29.69■■■□□ 2.34
PRPF40BQ6NWY9 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
PRPF40BQ6NWY9 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
PRPF40BQ6NWY9 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
PRPF40BQ6NWY9 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC29.68■■■□□ 2.34
PRPF40BQ6NWY9 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
PRPF40BQ6NWY9 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
PRPF40BQ6NWY9 MIR4466-201ENST00000606121 54 ntBASIC29.68■■■□□ 2.34
PRPF40BQ6NWY9 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC29.68■■■□□ 2.34
PRPF40BQ6NWY9 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
PRPF40BQ6NWY9 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC29.68■■■□□ 2.34
PRPF40BQ6NWY9 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
PRPF40BQ6NWY9 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
PRPF40BQ6NWY9 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
PRPF40BQ6NWY9 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC29.67■■■□□ 2.34
PRPF40BQ6NWY9 MTDHP2-201ENST00000601468 714 ntBASIC29.67■■■□□ 2.34
PRPF40BQ6NWY9 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC29.67■■■□□ 2.34
PRPF40BQ6NWY9 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
PRPF40BQ6NWY9 SENP5-202ENST00000419026 973 ntTSL 3 BASIC29.65■■■□□ 2.34
PRPF40BQ6NWY9 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC29.64■■■□□ 2.34
PRPF40BQ6NWY9 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
PRPF40BQ6NWY9 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC29.64■■■□□ 2.34
PRPF40BQ6NWY9 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
PRPF40BQ6NWY9 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC29.64■■■□□ 2.34
PRPF40BQ6NWY9 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
PRPF40BQ6NWY9 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC29.64■■■□□ 2.33
PRPF40BQ6NWY9 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC29.63■■■□□ 2.33
PRPF40BQ6NWY9 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
PRPF40BQ6NWY9 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC29.63■■■□□ 2.33
PRPF40BQ6NWY9 AL356740.2-201ENST00000601559 647 ntBASIC29.63■■■□□ 2.33
PRPF40BQ6NWY9 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC29.63■■■□□ 2.33
PRPF40BQ6NWY9 AP004609.3-201ENST00000610705 1884 ntBASIC29.62■■■□□ 2.33
PRPF40BQ6NWY9 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
PRPF40BQ6NWY9 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC29.62■■■□□ 2.33
PRPF40BQ6NWY9 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC29.62■■■□□ 2.33
PRPF40BQ6NWY9 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
PRPF40BQ6NWY9 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC29.61■■■□□ 2.33
PRPF40BQ6NWY9 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC29.61■■■□□ 2.33
PRPF40BQ6NWY9 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC29.61■■■□□ 2.33
PRPF40BQ6NWY9 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
PRPF40BQ6NWY9 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC29.6■■■□□ 2.33
PRPF40BQ6NWY9 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC29.6■■■□□ 2.33
PRPF40BQ6NWY9 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC29.6■■■□□ 2.33
PRPF40BQ6NWY9 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
PRPF40BQ6NWY9 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
PRPF40BQ6NWY9 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms