Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01554Q52M75 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC11.78□□□□□ -0.52
LINC01554Q52M75 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
LINC01554Q52M75 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC11.78□□□□□ -0.52
LINC01554Q52M75 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
LINC01554Q52M75 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01554Q52M75 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01554Q52M75 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01554Q52M75 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC11.78□□□□□ -0.52
LINC01554Q52M75 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC11.78□□□□□ -0.52
LINC01554Q52M75 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC11.78□□□□□ -0.52
LINC01554Q52M75 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01554Q52M75 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01554Q52M75 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01554Q52M75 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01554Q52M75 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01554Q52M75 HCG11-201ENST00000411553 5696 ntBASIC11.77□□□□□ -0.52
LINC01554Q52M75 C1orf229-201ENST00000623686 2258 ntBASIC11.77□□□□□ -0.52
LINC01554Q52M75 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
LINC01554Q52M75 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
LINC01554Q52M75 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.52
LINC01554Q52M75 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.52
LINC01554Q52M75 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC11.77□□□□□ -0.53
LINC01554Q52M75 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
LINC01554Q52M75 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
LINC01554Q52M75 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC11.77□□□□□ -0.53
LINC01554Q52M75 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LINC01554Q52M75 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
LINC01554Q52M75 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LINC01554Q52M75 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
LINC01554Q52M75 SHF-208ENST00000560734 1731 ntTSL 3 BASIC11.77□□□□□ -0.53
LINC01554Q52M75 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC11.77□□□□□ -0.53
LINC01554Q52M75 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
LINC01554Q52M75 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
LINC01554Q52M75 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
LINC01554Q52M75 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
LINC01554Q52M75 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC01554Q52M75 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC11.76□□□□□ -0.53
LINC01554Q52M75 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC11.76□□□□□ -0.53
LINC01554Q52M75 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC11.76□□□□□ -0.53
LINC01554Q52M75 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC01554Q52M75 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC11.76□□□□□ -0.53
LINC01554Q52M75 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC11.76□□□□□ -0.53
LINC01554Q52M75 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC01554Q52M75 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC01554Q52M75 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC11.75□□□□□ -0.53
LINC01554Q52M75 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC01554Q52M75 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC01554Q52M75 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC01554Q52M75 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC11.75□□□□□ -0.53
LINC01554Q52M75 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC01554Q52M75 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC01554Q52M75 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LINC01554Q52M75 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LINC01554Q52M75 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC01554Q52M75 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
LINC01554Q52M75 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
LINC01554Q52M75 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC01554Q52M75 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LINC01554Q52M75 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC11.75□□□□□ -0.53
LINC01554Q52M75 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LINC01554Q52M75 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
LINC01554Q52M75 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
LINC01554Q52M75 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC01554Q52M75 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC11.74□□□□□ -0.53
LINC01554Q52M75 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LINC01554Q52M75 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
LINC01554Q52M75 DRD5P2-201ENST00000421395 2012 ntBASIC11.74□□□□□ -0.53
LINC01554Q52M75 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LINC01554Q52M75 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC11.74□□□□□ -0.53
LINC01554Q52M75 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
LINC01554Q52M75 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC01554Q52M75 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC01554Q52M75 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01554Q52M75 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01554Q52M75 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01554Q52M75 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01554Q52M75 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01554Q52M75 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01554Q52M75 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01554Q52M75 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01554Q52M75 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01554Q52M75 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
LINC01554Q52M75 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
LINC01554Q52M75 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01554Q52M75 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01554Q52M75 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01554Q52M75 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01554Q52M75 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01554Q52M75 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC11.73□□□□□ -0.53
LINC01554Q52M75 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01554Q52M75 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01554Q52M75 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01554Q52M75 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01554Q52M75 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
LINC01554Q52M75 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01554Q52M75 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01554Q52M75 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC11.72□□□□□ -0.53
LINC01554Q52M75 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC11.72□□□□□ -0.53
LINC01554Q52M75 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms