Protein–RNA interactions for Protein: Q2WGJ8

TMEM249, Transmembrane protein 249, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM249Q2WGJ8 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TMEM249Q2WGJ8 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TMEM249Q2WGJ8 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.89■□□□□ 0.77
TMEM249Q2WGJ8 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TMEM249Q2WGJ8 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
TMEM249Q2WGJ8 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.89■□□□□ 0.77
TMEM249Q2WGJ8 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
TMEM249Q2WGJ8 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TMEM249Q2WGJ8 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TMEM249Q2WGJ8 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TMEM249Q2WGJ8 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TMEM249Q2WGJ8 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TMEM249Q2WGJ8 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TMEM249Q2WGJ8 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TMEM249Q2WGJ8 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.88■□□□□ 0.77
TMEM249Q2WGJ8 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.88■□□□□ 0.77
TMEM249Q2WGJ8 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.88■□□□□ 0.77
TMEM249Q2WGJ8 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TMEM249Q2WGJ8 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TMEM249Q2WGJ8 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TMEM249Q2WGJ8 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TMEM249Q2WGJ8 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TMEM249Q2WGJ8 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
TMEM249Q2WGJ8 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.86■□□□□ 0.77
TMEM249Q2WGJ8 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.86■□□□□ 0.77
TMEM249Q2WGJ8 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TMEM249Q2WGJ8 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
TMEM249Q2WGJ8 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
TMEM249Q2WGJ8 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.85■□□□□ 0.77
TMEM249Q2WGJ8 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TMEM249Q2WGJ8 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC19.85■□□□□ 0.77
TMEM249Q2WGJ8 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TMEM249Q2WGJ8 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
TMEM249Q2WGJ8 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TMEM249Q2WGJ8 MIR638-201ENST00000385237 100 ntBASIC19.85■□□□□ 0.77
TMEM249Q2WGJ8 AC092028.1-203ENST00000608262 953 ntBASIC19.85■□□□□ 0.77
TMEM249Q2WGJ8 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TMEM249Q2WGJ8 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TMEM249Q2WGJ8 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TMEM249Q2WGJ8 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
TMEM249Q2WGJ8 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TMEM249Q2WGJ8 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.84■□□□□ 0.77
TMEM249Q2WGJ8 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.84■□□□□ 0.77
TMEM249Q2WGJ8 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.84■□□□□ 0.77
TMEM249Q2WGJ8 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.84■□□□□ 0.77
TMEM249Q2WGJ8 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TMEM249Q2WGJ8 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
TMEM249Q2WGJ8 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
TMEM249Q2WGJ8 AC145676.1-201ENST00000514988 2004 ntBASIC19.83■□□□□ 0.77
TMEM249Q2WGJ8 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TMEM249Q2WGJ8 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.83■□□□□ 0.77
TMEM249Q2WGJ8 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TMEM249Q2WGJ8 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
TMEM249Q2WGJ8 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.82■□□□□ 0.76
TMEM249Q2WGJ8 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
TMEM249Q2WGJ8 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TMEM249Q2WGJ8 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TMEM249Q2WGJ8 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.82■□□□□ 0.76
TMEM249Q2WGJ8 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.82■□□□□ 0.76
TMEM249Q2WGJ8 AL139246.5-201ENST00000606645 996 ntBASIC19.82■□□□□ 0.76
TMEM249Q2WGJ8 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.82■□□□□ 0.76
TMEM249Q2WGJ8 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TMEM249Q2WGJ8 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TMEM249Q2WGJ8 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.82■□□□□ 0.76
TMEM249Q2WGJ8 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.82■□□□□ 0.76
TMEM249Q2WGJ8 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TMEM249Q2WGJ8 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
TMEM249Q2WGJ8 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
TMEM249Q2WGJ8 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TMEM249Q2WGJ8 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TMEM249Q2WGJ8 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
TMEM249Q2WGJ8 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
TMEM249Q2WGJ8 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.81■□□□□ 0.76
TMEM249Q2WGJ8 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
TMEM249Q2WGJ8 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
TMEM249Q2WGJ8 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.81■□□□□ 0.76
TMEM249Q2WGJ8 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TMEM249Q2WGJ8 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.8■□□□□ 0.76
TMEM249Q2WGJ8 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TMEM249Q2WGJ8 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TMEM249Q2WGJ8 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TMEM249Q2WGJ8 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TMEM249Q2WGJ8 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.8■□□□□ 0.76
TMEM249Q2WGJ8 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.8■□□□□ 0.76
TMEM249Q2WGJ8 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.8■□□□□ 0.76
TMEM249Q2WGJ8 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.8■□□□□ 0.76
TMEM249Q2WGJ8 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.8■□□□□ 0.76
TMEM249Q2WGJ8 AC131281.2-201ENST00000520478 145 ntBASIC19.8■□□□□ 0.76
TMEM249Q2WGJ8 MIR4281-201ENST00000580852 62 ntBASIC19.8■□□□□ 0.76
TMEM249Q2WGJ8 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.8■□□□□ 0.76
TMEM249Q2WGJ8 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TMEM249Q2WGJ8 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TMEM249Q2WGJ8 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TMEM249Q2WGJ8 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
TMEM249Q2WGJ8 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.79■□□□□ 0.76
TMEM249Q2WGJ8 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC19.79■□□□□ 0.76
TMEM249Q2WGJ8 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
TMEM249Q2WGJ8 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TMEM249Q2WGJ8 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC19.79■□□□□ 0.76
TMEM249Q2WGJ8 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms